BLASTX nr result

ID: Coptis25_contig00028715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028715
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]    72   6e-11
ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...    71   8e-11
emb|CBI17533.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...    71   8e-11
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    70   2e-10

>emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]
          Length = 716

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   YQVLIFSQWTNILDLIECYFGEKRLEVCRIDGSVKLNERKRQV 130
           ++VLIFSQWT ILD++E YF EK LEVCRIDGSV+L+ERKRQV
Sbjct: 467 HKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQV 509


>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   YQVLIFSQWTNILDLIECYFGEKRLEVCRIDGSVKLNERKRQV 130
           ++VLIFSQWT ILD++E YF EK LEVCRIDGSV+L+ERKRQ+
Sbjct: 530 HKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQI 572


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   YQVLIFSQWTNILDLIECYFGEKRLEVCRIDGSVKLNERKRQV 130
           ++VLIFSQWT ILD++E YF EK LEVCRIDGSV+L+ERKRQ+
Sbjct: 571 HKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQI 613


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
           communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
           remodeling complex ATPase ISW1, putative [Ricinus
           communis]
          Length = 788

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   YQVLIFSQWTNILDLIECYFGEKRLEVCRIDGSVKLNERKRQV 130
           ++VLIFSQWT ILD+++ YF EK LEVCRIDGSVKL+ERKRQ+
Sbjct: 559 HKVLIFSQWTKILDIMDYYFSEKGLEVCRIDGSVKLDERKRQI 601


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +2

Query: 2   YQVLIFSQWTNILDLIECYFGEKRLEVCRIDGSVKLNERKRQV 130
           ++VLIFSQWT ILD+++ YF EK  EVCRIDGSVKL+ERKRQ+
Sbjct: 598 HKVLIFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLDERKRQI 640


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