BLASTX nr result
ID: Coptis25_contig00028713
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028713 (474 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 185 3e-45 emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 172 3e-41 emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera] 171 7e-41 gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 170 1e-40 gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 168 5e-40 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 185 bits (470), Expect = 3e-45 Identities = 86/158 (54%), Positives = 108/158 (68%) Frame = +1 Query: 1 DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180 D FS F ++ L+ V+ +RS+ GGEF + +SF N+ GI HQ SC HT EQNG Sbjct: 832 DVFSTLKTFILKLQTLLDLQVQSIRSDSGGEFLNKSLQSFFNEQGITHQLSCLHTSEQNG 891 Query: 181 VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360 ERKHRH++EM RTLLSQS+LPT W+E QT +LINRLP P I PWE +F P Sbjct: 892 CAERKHRHVVEMGRTLLSQSDLPTQFWVEAFQTVVYLINRLP-PQSSVISPWELLFHASP 950 Query: 361 NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYSL 474 Y LK++GC+C+PWL+PYS KLD +SK CVF+GYSL Sbjct: 951 KYHTLKAFGCACYPWLQPYSRDKLDFKSKQCVFLGYSL 988 >emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] Length = 1171 Score = 172 bits (436), Expect = 3e-41 Identities = 77/157 (49%), Positives = 110/157 (70%) Frame = +1 Query: 1 DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180 D F+ FVKFKT+ E + +K ++++ GGEF+S QFK FL GI H+ +C HT +QNG Sbjct: 559 DVFATFVKFKTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNG 618 Query: 181 VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360 +VERKHRH+ EM TLL+QS+L W++ T+ FLINRLP+ L N+ P+ + + P Sbjct: 619 IVERKHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLINRLPTKVLDNLTPYFLLHKTEP 678 Query: 361 NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYS 471 Y L+ +GC+C+P L+PY++HKL RSK C+F+GYS Sbjct: 679 TYMDLRVFGCACYPLLRPYNDHKLTFRSKKCIFLGYS 715 >emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera] Length = 1884 Score = 171 bits (432), Expect = 7e-41 Identities = 79/157 (50%), Positives = 108/157 (68%) Frame = +1 Query: 1 DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180 DFF CF+KF+ L+E+QL +K +S+ GGEF S +F++ L+K GI Q SC TPEQNG Sbjct: 505 DFFECFLKFQILVENQLERRIKIFQSDGGGEFQSIKFQNHLSKCGILQQVSCPGTPEQNG 564 Query: 181 VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360 V ERKHRH++EM T+L + LP SLW++ TA +LINRLPS L+ P+ +F+Q P Sbjct: 565 VAERKHRHIVEMGLTMLFNAKLPLSLWVDAFLTAVYLINRLPSTVLKMESPFFMLFKQYP 624 Query: 361 NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYS 471 Y L+ +GC CFP+L+ Y +K ++ CVFIGYS Sbjct: 625 EYRSLRIFGCQCFPYLRDYGKNKFSPKTYPCVFIGYS 661 >gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] Length = 1534 Score = 170 bits (431), Expect = 1e-40 Identities = 80/153 (52%), Positives = 106/153 (69%) Frame = +1 Query: 16 FVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNGVVERK 195 FV FK L+E++ ++ + S+ GGEF + + FL GI H S HTPE NG+ ERK Sbjct: 664 FVAFKALVENRFQTKIRTLYSDNGGEFIA--LRQFLLTHGISHLTSLPHTPEHNGIAERK 721 Query: 196 HRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLPNYSIL 375 HRH+LE TLL+Q+++PTS W TA +LINRLPS L N P+ K+F+ PNY L Sbjct: 722 HRHILETGLTLLTQASIPTSYWTYAFGTAVYLINRLPSSVLNNESPYSKLFKTSPNYLKL 781 Query: 376 KSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYSL 474 + +GCSCFPWL+PY+NHKL+ RS+ CVF+GYSL Sbjct: 782 RVFGCSCFPWLRPYTNHKLERRSQPCVFLGYSL 814 >gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] Length = 1453 Score = 168 bits (425), Expect = 5e-40 Identities = 73/157 (46%), Positives = 107/157 (68%) Frame = +1 Query: 1 DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180 DFF+ FV F+ L+E+Q N +K +S+ GGEF+S K L GI+H+ SC +TP+QNG Sbjct: 558 DFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNG 617 Query: 181 VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360 + ERKHRH +E+ +++ S+ P W+E TA+FL N LPSPSL N+ P E + +Q P Sbjct: 618 IAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASFLSNMLPSPSLGNVSPLEALLKQKP 677 Query: 361 NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYS 471 NY++L+ +G +C+P L+P HK + RS CVF+GY+ Sbjct: 678 NYAMLRVFGTACYPCLRPLGEHKFEPRSLQCVFLGYN 714