BLASTX nr result

ID: Coptis25_contig00028713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028713
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                185   3e-45
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   172   3e-41
emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]   171   7e-41
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              170   1e-40
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           168   5e-40

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/158 (54%), Positives = 108/158 (68%)
 Frame = +1

Query: 1    DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180
            D FS    F   ++  L+  V+ +RS+ GGEF +   +SF N+ GI HQ SC HT EQNG
Sbjct: 832  DVFSTLKTFILKLQTLLDLQVQSIRSDSGGEFLNKSLQSFFNEQGITHQLSCLHTSEQNG 891

Query: 181  VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360
              ERKHRH++EM RTLLSQS+LPT  W+E  QT  +LINRLP P    I PWE +F   P
Sbjct: 892  CAERKHRHVVEMGRTLLSQSDLPTQFWVEAFQTVVYLINRLP-PQSSVISPWELLFHASP 950

Query: 361  NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYSL 474
             Y  LK++GC+C+PWL+PYS  KLD +SK CVF+GYSL
Sbjct: 951  KYHTLKAFGCACYPWLQPYSRDKLDFKSKQCVFLGYSL 988


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  172 bits (436), Expect = 3e-41
 Identities = 77/157 (49%), Positives = 110/157 (70%)
 Frame = +1

Query: 1    DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180
            D F+ FVKFKT+ E   +  +K ++++ GGEF+S QFK FL   GI H+ +C HT +QNG
Sbjct: 559  DVFATFVKFKTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNG 618

Query: 181  VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360
            +VERKHRH+ EM  TLL+QS+L    W++   T+ FLINRLP+  L N+ P+  + +  P
Sbjct: 619  IVERKHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLINRLPTKVLDNLTPYFLLHKTEP 678

Query: 361  NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYS 471
             Y  L+ +GC+C+P L+PY++HKL  RSK C+F+GYS
Sbjct: 679  TYMDLRVFGCACYPLLRPYNDHKLTFRSKKCIFLGYS 715


>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
          Length = 1884

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/157 (50%), Positives = 108/157 (68%)
 Frame = +1

Query: 1   DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180
           DFF CF+KF+ L+E+QL   +K  +S+ GGEF S +F++ L+K GI  Q SC  TPEQNG
Sbjct: 505 DFFECFLKFQILVENQLERRIKIFQSDGGGEFQSIKFQNHLSKCGILQQVSCPGTPEQNG 564

Query: 181 VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360
           V ERKHRH++EM  T+L  + LP SLW++   TA +LINRLPS  L+   P+  +F+Q P
Sbjct: 565 VAERKHRHIVEMGLTMLFNAKLPLSLWVDAFLTAVYLINRLPSTVLKMESPFFMLFKQYP 624

Query: 361 NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYS 471
            Y  L+ +GC CFP+L+ Y  +K   ++  CVFIGYS
Sbjct: 625 EYRSLRIFGCQCFPYLRDYGKNKFSPKTYPCVFIGYS 661


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/153 (52%), Positives = 106/153 (69%)
 Frame = +1

Query: 16   FVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNGVVERK 195
            FV FK L+E++    ++ + S+ GGEF +   + FL   GI H  S  HTPE NG+ ERK
Sbjct: 664  FVAFKALVENRFQTKIRTLYSDNGGEFIA--LRQFLLTHGISHLTSLPHTPEHNGIAERK 721

Query: 196  HRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLPNYSIL 375
            HRH+LE   TLL+Q+++PTS W     TA +LINRLPS  L N  P+ K+F+  PNY  L
Sbjct: 722  HRHILETGLTLLTQASIPTSYWTYAFGTAVYLINRLPSSVLNNESPYSKLFKTSPNYLKL 781

Query: 376  KSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYSL 474
            + +GCSCFPWL+PY+NHKL+ RS+ CVF+GYSL
Sbjct: 782  RVFGCSCFPWLRPYTNHKLERRSQPCVFLGYSL 814


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  168 bits (425), Expect = 5e-40
 Identities = 73/157 (46%), Positives = 107/157 (68%)
 Frame = +1

Query: 1    DFFSCFVKFKTLIEHQLNYHVKCVRSNCGGEFSSTQFKSFLNKTGIEHQFSCAHTPEQNG 180
            DFF+ FV F+ L+E+Q N  +K  +S+ GGEF+S   K  L   GI+H+ SC +TP+QNG
Sbjct: 558  DFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNG 617

Query: 181  VVERKHRHLLEMTRTLLSQSNLPTSLWLEVIQTAAFLINRLPSPSLQNICPWEKIFQQLP 360
            + ERKHRH +E+  +++  S+ P   W+E   TA+FL N LPSPSL N+ P E + +Q P
Sbjct: 618  IAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASFLSNMLPSPSLGNVSPLEALLKQKP 677

Query: 361  NYSILKSYGCSCFPWLKPYSNHKLDMRSKHCVFIGYS 471
            NY++L+ +G +C+P L+P   HK + RS  CVF+GY+
Sbjct: 678  NYAMLRVFGTACYPCLRPLGEHKFEPRSLQCVFLGYN 714


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