BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028702
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...    66   3e-09
ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated f...    66   3e-09
ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated f...    66   3e-09

>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
           [Vitis vinifera]
          Length = 2060

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/98 (39%), Positives = 56/98 (57%)
 Frame = +2

Query: 2   PDLSSKSVHSDKTEVKQELTTLKGKMELDLNVQVPGEETKPNWKKLKLEDGICSTIYTMT 181
           PDLSS +    + + K    TLK + E+DLN+QVP +E++PN K+LK ED     + T+ 
Sbjct: 347 PDLSSGAASFIELKEKDNSNTLKREREIDLNMQVPADESEPNLKRLKSEDLSSPLMDTVG 406

Query: 182 SVDEGANPGTCIKMEDGGCDLIPE*VSDVLKVESAKVE 295
           S    AN    I++ED GC+L     +  L V S KV+
Sbjct: 407 SAGNHANLDIRIRVEDSGCNLPAWQANGELDVSSVKVK 444


>ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 2
           [Vitis vinifera]
          Length = 2089

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/98 (39%), Positives = 56/98 (57%)
 Frame = +2

Query: 2   PDLSSKSVHSDKTEVKQELTTLKGKMELDLNVQVPGEETKPNWKKLKLEDGICSTIYTMT 181
           PDLSS +    + + K    TLK + E+DLN+QVP +E++PN K+LK ED     + T+ 
Sbjct: 376 PDLSSGAASFIELKEKDNSNTLKREREIDLNMQVPADESEPNLKRLKSEDLSSPLMDTVG 435

Query: 182 SVDEGANPGTCIKMEDGGCDLIPE*VSDVLKVESAKVE 295
           S    AN    I++ED GC+L     +  L V S KV+
Sbjct: 436 SAGNHANLDIRIRVEDSGCNLPAWQANGELDVSSVKVK 473


>ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 1
           [Vitis vinifera]
          Length = 2052

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/98 (39%), Positives = 56/98 (57%)
 Frame = +2

Query: 2   PDLSSKSVHSDKTEVKQELTTLKGKMELDLNVQVPGEETKPNWKKLKLEDGICSTIYTMT 181
           PDLSS +    + + K    TLK + E+DLN+QVP +E++PN K+LK ED     + T+ 
Sbjct: 339 PDLSSGAASFIELKEKDNSNTLKREREIDLNMQVPADESEPNLKRLKSEDLSSPLMDTVG 398

Query: 182 SVDEGANPGTCIKMEDGGCDLIPE*VSDVLKVESAKVE 295
           S    AN    I++ED GC+L     +  L V S KV+
Sbjct: 399 SAGNHANLDIRIRVEDSGCNLPAWQANGELDVSSVKVK 436