BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028697
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydr...    87   2e-15
ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus c...    77   1e-12
ref|XP_001761240.1| predicted protein [Physcomitrella patens sub...    62   5e-08
ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydr...    60   1e-07
ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus c...    60   2e-07

>ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222861143|gb|EEE98685.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 504

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
 Frame = +1

Query: 115 MASKSDVLICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDVEKLIKQKS 294
           MA K+++L+CT L+C+T  EM++SM  A+TEGADL ELR+DSLS F    +VEKLIKQ++
Sbjct: 1   MAFKNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLS-FSHNSEVEKLIKQRT 59

Query: 295 LPVIVSFRL------GGKEDKRTCFRV 357
           LP IVSFRL        K+ K TC +V
Sbjct: 60  LPSIVSFRLEPSRISSNKDRKNTCLQV 86


>ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223540079|gb|EEF41656.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 515

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 6/87 (6%)
 Frame = +1

Query: 115 MASKSDVLICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDVEKLIKQKS 294
           MA ++++L+CT L+C+T  EM++ M+ A+ EGADL ELR+DS+S F  +  VEKLIK ++
Sbjct: 1   MAFQNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMS-FSHISQVEKLIKLRT 59

Query: 295 LPVIVSFR------LGGKEDKRTCFRV 357
           LP IVSFR          + K+TC +V
Sbjct: 60  LPAIVSFRPKTSKISSNGDSKKTCLQV 86


>ref|XP_001761240.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687580|gb|EDQ73962.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 519

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/68 (47%), Positives = 43/68 (63%)
 Frame = +1

Query: 115 MASKSDVLICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDVEKLIKQKS 294
           M      LIC  L  KTV++M+  ++ AK  GAD+AELR+D +S FD   D+  L+K K 
Sbjct: 1   MDPSKQCLICVPLTAKTVKKMLFQLELAKESGADVAELRVDLISGFDAAADLPVLLKDKP 60

Query: 295 LPVIVSFR 318
           LPVIV+ R
Sbjct: 61  LPVIVTPR 68


>ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222838117|gb|EEE76482.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/64 (40%), Positives = 44/64 (68%)
 Frame = +1

Query: 127 SDVLICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDVEKLIKQKSLPVI 306
           + V++C  L  ++V++MV  M +AK +GAD+ E+R+D +S F    D+E +I+ K LPVI
Sbjct: 9   NSVMVCAPLMAQSVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETIIRNKPLPVI 68

Query: 307 VSFR 318
           + +R
Sbjct: 69  IVYR 72


>ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223548259|gb|EEF49750.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 519

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/64 (39%), Positives = 45/64 (70%)
 Frame = +1

Query: 127 SDVLICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDVEKLIKQKSLPVI 306
           S V++CT L  ++V++M++ M  AKT+GAD+ E+R+D +  F    D++ +++ K LPVI
Sbjct: 9   SSVMVCTPLMAQSVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAILRNKPLPVI 68

Query: 307 VSFR 318
           + +R
Sbjct: 69  IVYR 72