BLASTX nr result

ID: Coptis25_contig00028696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028696
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
gb|ABK93787.1| unknown [Populus trichocarpa]                          163   2e-38
emb|CBI24673.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis ...   158   5e-37

>ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|222862926|gb|EEF00433.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  164 bits (415), Expect = 7e-39
 Identities = 74/92 (80%), Positives = 86/92 (93%)
 Frame = -3

Query: 277 FTLPLVITSQQLNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTEDSDDSMS 98
           F LP+V + +QL+++ECE+LGFTGLALCSDCNT AEYVKN+ELVSDC KCCTEDSDDS+S
Sbjct: 6   FVLPIVKSKEQLSSRECEDLGFTGLALCSDCNTLAEYVKNQELVSDCLKCCTEDSDDSIS 65

Query: 97  KITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQ 2
           KITYSGA++EVC RKLVFYPE+VGFIEEEKDQ
Sbjct: 66  KITYSGAIIEVCMRKLVFYPEIVGFIEEEKDQ 97


>ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|222872257|gb|EEF09388.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/99 (74%), Positives = 90/99 (90%)
 Frame = -3

Query: 298 VLKFVLCFTLPLVITSQQLNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTE 119
           +L  ++ F LP+V + +QL++ ECE+LGF+GLALCSDC+TF+EYVKN+ELVSDC KCCTE
Sbjct: 8   ILLLLVTFILPIVKSKEQLSSGECEDLGFSGLALCSDCHTFSEYVKNQELVSDCLKCCTE 67

Query: 118 DSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQ 2
           DSDDS+SKITYSGA+LEVC RKLVFYPE+VGFIEEEKDQ
Sbjct: 68  DSDDSISKITYSGAILEVCMRKLVFYPEIVGFIEEEKDQ 106


>gb|ABK93787.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/99 (74%), Positives = 90/99 (90%)
 Frame = -3

Query: 298 VLKFVLCFTLPLVITSQQLNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTE 119
           +L  ++ F LP+V + +QL++ ECE+LGF+GLALCSDC+TF+EYVKN+ELVSDC KCCTE
Sbjct: 16  ILLLLVTFILPIVKSKEQLSSGECEDLGFSGLALCSDCHTFSEYVKNQELVSDCLKCCTE 75

Query: 118 DSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQ 2
           DSDDS+SKITYSGA+LEVC RKLVFYPE+VGFIEEEKDQ
Sbjct: 76  DSDDSISKITYSGAILEVCMRKLVFYPEIVGFIEEEKDQ 114


>emb|CBI24673.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/97 (78%), Positives = 88/97 (90%), Gaps = 3/97 (3%)
 Frame = -3

Query: 283 LCF--TLPLVITSQQ-LNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTEDS 113
           +CF   +PL  +S++ L++KECENLGF+GLALCSDCNT AEYVK++ELVSDC KCCTEDS
Sbjct: 1   MCFLVVVPLASSSREVLSSKECENLGFSGLALCSDCNTLAEYVKDQELVSDCLKCCTEDS 60

Query: 112 DDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQ 2
           DDSMSKITYSGA+LEVC RKLVFYPEVVGFIEEEKD+
Sbjct: 61  DDSMSKITYSGAILEVCMRKLVFYPEVVGFIEEEKDK 97


>ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis vinifera]
          Length = 165

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/97 (78%), Positives = 88/97 (90%), Gaps = 3/97 (3%)
 Frame = -3

Query: 283 LCF--TLPLVITSQQ-LNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTEDS 113
           +CF   +PL  +S++ L++KECENLGF+GLALCSDCNT AEYVK++ELVSDC KCCTEDS
Sbjct: 15  MCFLVVVPLASSSREVLSSKECENLGFSGLALCSDCNTLAEYVKDQELVSDCLKCCTEDS 74

Query: 112 DDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQ 2
           DDSMSKITYSGA+LEVC RKLVFYPEVVGFIEEEKD+
Sbjct: 75  DDSMSKITYSGAILEVCMRKLVFYPEVVGFIEEEKDK 111


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