BLASTX nr result

ID: Coptis25_contig00028692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028692
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267...   287   2e-75
ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu...   275   9e-72
ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|2...   264   2e-68
ref|XP_004170022.1| PREDICTED: uncharacterized protein LOC101225...   255   7e-66
ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206...   255   7e-66

>ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267210 [Vitis vinifera]
            gi|147841364|emb|CAN71240.1| hypothetical protein
            VITISV_034160 [Vitis vinifera]
            gi|296085846|emb|CBI31170.3| unnamed protein product
            [Vitis vinifera]
          Length = 570

 Score =  287 bits (734), Expect = 2e-75
 Identities = 160/258 (62%), Positives = 191/258 (74%), Gaps = 5/258 (1%)
 Frame = -1

Query: 760  QPIVPPDFPLDTPPNLRTTMPDRPVSAGRSRPSAAVSGRGNSEPGLTNPPRRQSSSPIVT 581
            QPIV PDFPLDTPPNLRTT+PDRP+SAGRSRP AA++ +GNSE      P R+ SSPIVT
Sbjct: 313  QPIVLPDFPLDTPPNLRTTLPDRPLSAGRSRPGAAMTMKGNSET-----PTRRQSSPIVT 367

Query: 580  RGRLPDPPGKGRLHSNGNSINAVESQRTPPVIDPASRRPAK-SATATESSGFGRTISKKS 404
            RGR+ +P  +GRLHSNG+  ++ ES++   V +P SR+P K S T++ES+GFGRTISKKS
Sbjct: 368  RGRVSEPNARGRLHSNGHVADSPESRKASHVTEP-SRKPVKTSTTSSESTGFGRTISKKS 426

Query: 403  LDMALRHMDIRHGSGSIRSSPGSTLFPQSIRLGTAKGQSAH---VSDVPAPVGSNGGPPT 233
            LDMA+RHMDIR+G+GSIR   G+TLFPQSIR   +K QSA     S  PA V SNG  P 
Sbjct: 427  LDMAIRHMDIRNGTGSIRPLSGTTLFPQSIRSAASKTQSARASSASSAPASVNSNGSLPA 486

Query: 232  SSNIDILENGSCTGRFLDGEFAEDFSRFSAKLSELDIYESSRYDAILLKEDSKNTNWLLD 53
            S+N    ENG+   R  +    ED  RFSAKL++ DIYESSRYDAILLKED KNTNWL  
Sbjct: 487  SNNGVPSENGNYFTRPSENGAEEDDGRFSAKLNQTDIYESSRYDAILLKEDLKNTNWLHS 546

Query: 52   -DKSDQGFMFDHRFELLP 2
             DKSDQG +FD+ FE LP
Sbjct: 547  VDKSDQGPIFDNGFEQLP 564


>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
            gi|223531882|gb|EEF33699.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 580

 Score =  275 bits (703), Expect = 9e-72
 Identities = 153/255 (60%), Positives = 187/255 (73%), Gaps = 4/255 (1%)
 Frame = -1

Query: 760  QPIVPPDFPLDTPPNLRTTMPDRPVSAGRSRPSAAVSGRGNSE-PGLTNPPRRQSSSPIV 584
            QP+VPPDFPLDTPPNLRTT+PDRP+SAGRSRP A+ + +G+ E  G TN PRR  SSPIV
Sbjct: 330  QPVVPPDFPLDTPPNLRTTLPDRPISAGRSRPGASTTIKGSPETTGATNVPRRH-SSPIV 388

Query: 583  TRGRLPDPPGKGRLHSNGNSINAVESQRTPPVIDPASRRPAKSA-TATESSGFGRTISKK 407
            +RGRL + PGKGR HSNG++ +  E ++   V DP  R+P KS+ T T+++GFGRTISKK
Sbjct: 389  SRGRLAEAPGKGRAHSNGHAADISEPRKVSHVSDPGMRKPVKSSVTTTDNNGFGRTISKK 448

Query: 406  SLDMALRHMDIRHGSGSIRSSPGSTLFPQSIRLGTAKGQSAHVSDVPAPVGSNGGPPTSS 227
            SLDMA+RHMDIR G+GS R+   +TLFPQSIR  T K QS  V  + AP  +N G     
Sbjct: 449  SLDMAIRHMDIRTGNGSTRALSSTTLFPQSIRTAT-KAQS--VRPMNAPESNNNG----- 500

Query: 226  NIDILENGSCTGRFLDGEFAEDFSRFSAKLSELDIYESSRYDAILLKEDSKNTNWL--LD 53
               ILENG    R ++     +  R+SAKLSE+DIYESSRYDA+LLKED KNTNWL  +D
Sbjct: 501  --GILENGHHVSRPVEYGSEVNDGRYSAKLSEVDIYESSRYDALLLKEDLKNTNWLHSID 558

Query: 52   DKSDQGFMFDHRFEL 8
            DKSDQG +FD+ FEL
Sbjct: 559  DKSDQGSIFDNGFEL 573


>ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|222868313|gb|EEF05444.1|
            predicted protein [Populus trichocarpa]
          Length = 596

 Score =  264 bits (674), Expect = 2e-68
 Identities = 153/259 (59%), Positives = 185/259 (71%), Gaps = 6/259 (2%)
 Frame = -1

Query: 760  QPIVPPDFPLDTPPNLRTTMPDRPVSAGRSRPSAAVSGRGNSEP-GLTNPPRRQSSSPIV 584
            QP+VPPDFPLDTPPNLRTT+PDRP+SAGRSRP+   + +GN E  G    PRR SS PIV
Sbjct: 337  QPVVPPDFPLDTPPNLRTTLPDRPLSAGRSRPNVHATMKGNPETVGSVIAPRRHSS-PIV 395

Query: 583  TRGRLPDPPGKGRLHSNGNSINAVESQRTPPVIDPASRRPAKSA-TATESSGFGRTISKK 407
            +RGRL +P GKGR+HSNG+  +A E ++   V +   R+P KS+ TA+ES+GFGRTISKK
Sbjct: 396  SRGRLTEPSGKGRVHSNGHIADAPEPRKVSHVSELGMRKPVKSSSTASESTGFGRTISKK 455

Query: 406  SLDMALRHMDIRHGSGSIRSSPGSTLFPQSIRLGTAKGQSAHVSDVPAPVGSNGGPPTSS 227
            SLDMA+RHMD+R+G+GS RS   +TLFPQSIR  T K  SA     P  + +NG      
Sbjct: 456  SLDMAIRHMDLRNGTGSTRSLSSTTLFPQSIRSATPKTHSARSRSAPESI-NNG---NLQ 511

Query: 226  NIDILENGSCTGRFLD-GEFAEDFSRFSAKLSE-LDIYESSRYDAILLKEDSKNTNWL-- 59
            N D+LEN S   R  +    A D  R+SAKLSE +DI ESSRYDAILLKED KNT+WL  
Sbjct: 512  NGDVLENESYFSRATEIRREANDGQRYSAKLSEVVDICESSRYDAILLKEDLKNTDWLHS 571

Query: 58   LDDKSDQGFMFDHRFELLP 2
            +DDKSDQG  FD+ FE LP
Sbjct: 572  VDDKSDQGPFFDNGFEPLP 590


>ref|XP_004170022.1| PREDICTED: uncharacterized protein LOC101225804, partial [Cucumis
           sativus]
          Length = 484

 Score =  255 bits (652), Expect = 7e-66
 Identities = 140/257 (54%), Positives = 183/257 (71%), Gaps = 4/257 (1%)
 Frame = -1

Query: 760 QPIVPPDFPLDTPPNLRTTMPDRPVSAGRSRPSAAVSGRGNSEPGLTNPPRRQSSSPIVT 581
           QPIVPPDFPLDTPPNLRTT+PDRP+SAGRSRP+ A S RG+ E   T    R+++SP +T
Sbjct: 223 QPIVPPDFPLDTPPNLRTTLPDRPISAGRSRPTPASSVRGSPETTSTGTVPRRAASPTIT 282

Query: 580 RGRLPDPPGKGRLHSNGNSINAVESQRTPPVIDPASRRPAKSATAT-ESSGFGRTISKKS 404
           RGR+ D PG+GRL++NG+  ++ E++R     D + RRP K++T T ES+GFGR+ISKKS
Sbjct: 283 RGRITDAPGRGRLNTNGHLSDSPETRRLSSSSDLSGRRPVKASTTTAESNGFGRSISKKS 342

Query: 403 LDMALRHMDIRHGSGSIRSSPGSTLFPQSIRLGTAKGQSAHVSDVPAPVGSNGGPPTSSN 224
           LDMA+RHMDIR+G GS+RS  G+TLFP SIR  T+K QS  +S+  A + ++    +++N
Sbjct: 343 LDMAIRHMDIRNGPGSVRSGSGNTLFPHSIRSATSKTQSIALSNSEA-IDTDYQMSSNNN 401

Query: 223 IDILENGSCTGRFLDGEF-AEDFSRFSAKLSELDIYESSRYDAILLKEDSKNTNWL--LD 53
           +D   +       +  E    +  RFSA L+ LDIYESSRYDAILLKED KNTNWL   D
Sbjct: 402 MDRGNHFHRPSATIGTEVGGGENGRFSASLNHLDIYESSRYDAILLKEDLKNTNWLHSTD 461

Query: 52  DKSDQGFMFDHRFELLP 2
           DK+D   + D+ FE LP
Sbjct: 462 DKTDLASILDNGFEALP 478


>ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206216 [Cucumis sativus]
          Length = 578

 Score =  255 bits (652), Expect = 7e-66
 Identities = 140/257 (54%), Positives = 183/257 (71%), Gaps = 4/257 (1%)
 Frame = -1

Query: 760  QPIVPPDFPLDTPPNLRTTMPDRPVSAGRSRPSAAVSGRGNSEPGLTNPPRRQSSSPIVT 581
            QPIVPPDFPLDTPPNLRTT+PDRP+SAGRSRP+ A S RG+ E   T    R+++SP +T
Sbjct: 317  QPIVPPDFPLDTPPNLRTTLPDRPISAGRSRPTPASSVRGSPETTSTGTVPRRAASPTIT 376

Query: 580  RGRLPDPPGKGRLHSNGNSINAVESQRTPPVIDPASRRPAKSATAT-ESSGFGRTISKKS 404
            RGR+ D PG+GRL++NG+  ++ E++R     D + RRP K++T T ES+GFGR+ISKKS
Sbjct: 377  RGRITDAPGRGRLNTNGHLSDSPETRRLSSSSDLSGRRPVKASTTTAESNGFGRSISKKS 436

Query: 403  LDMALRHMDIRHGSGSIRSSPGSTLFPQSIRLGTAKGQSAHVSDVPAPVGSNGGPPTSSN 224
            LDMA+RHMDIR+G GS+RS  G+TLFP SIR  T+K QS  +S+  A + ++    +++N
Sbjct: 437  LDMAIRHMDIRNGPGSVRSGSGNTLFPHSIRSATSKTQSIALSNSEA-IDTDYQMSSNNN 495

Query: 223  IDILENGSCTGRFLDGEF-AEDFSRFSAKLSELDIYESSRYDAILLKEDSKNTNWL--LD 53
            +D   +       +  E    +  RFSA L+ LDIYESSRYDAILLKED KNTNWL   D
Sbjct: 496  MDRGNHFHRPSATIGTEVGGGENGRFSASLNHLDIYESSRYDAILLKEDLKNTNWLHSTD 555

Query: 52   DKSDQGFMFDHRFELLP 2
            DK+D   + D+ FE LP
Sbjct: 556  DKTDLASILDNGFEALP 572


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