BLASTX nr result
ID: Coptis25_contig00028688
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028688 (791 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEH03199.1| phytoene synthase [Cucumis melo] 67 1e-18 ref|XP_004142164.1| PREDICTED: phytoene synthase 1, chloroplasti... 67 6e-18 ref|NP_001239926.1| uncharacterized protein LOC100776503 [Glycin... 69 2e-17 ref|XP_002297643.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-17 gb|AAV74394.1| phytoene synthase [Adonis aestivalis var. palaest... 67 4e-17 >gb|AEH03199.1| phytoene synthase [Cucumis melo] Length = 385 Score = 67.4 bits (163), Expect(2) = 1e-18 Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 2/42 (4%) Frame = -2 Query: 511 FSDMIEGM--NTRKSIYGNFQELYLYCYYVAGTVGLMSVPVM 392 F DMIEGM +T+K Y NF+ELYLYCYYVAGTVGLMSVPVM Sbjct: 190 FRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVM 231 Score = 52.0 bits (123), Expect(2) = 1e-18 Identities = 25/39 (64%), Positives = 28/39 (71%) Frame = -3 Query: 381 LGIAPESPTLVHIIYDVALCLGIGTQLTNILRDIVEDCT 265 +GIAP+S H IY AL LGIG QLTNILRD+ ED T Sbjct: 231 MGIAPDSSLSTHTIYSAALHLGIGNQLTNILRDVGEDAT 269 >ref|XP_004142164.1| PREDICTED: phytoene synthase 1, chloroplastic-like [Cucumis sativus] gi|449522422|ref|XP_004168225.1| PREDICTED: phytoene synthase 1, chloroplastic-like [Cucumis sativus] Length = 385 Score = 67.4 bits (163), Expect(2) = 6e-18 Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 2/42 (4%) Frame = -2 Query: 511 FSDMIEGM--NTRKSIYGNFQELYLYCYYVAGTVGLMSVPVM 392 F DMIEGM +T+K Y NF+ELYLYCYYVAGTVGLMSVPVM Sbjct: 190 FRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVM 231 Score = 49.7 bits (117), Expect(2) = 6e-18 Identities = 23/37 (62%), Positives = 27/37 (72%) Frame = -3 Query: 381 LGIAPESPTLVHIIYDVALCLGIGTQLTNILRDIVED 271 +GIAP+S H +Y AL LGIG QLTNILRD+ ED Sbjct: 231 MGIAPDSSLSTHTVYSAALHLGIGNQLTNILRDVGED 267 >ref|NP_001239926.1| uncharacterized protein LOC100776503 [Glycine max] gi|255636401|gb|ACU18539.1| unknown [Glycine max] Length = 396 Score = 68.6 bits (166), Expect(2) = 2e-17 Identities = 34/42 (80%), Positives = 35/42 (83%), Gaps = 2/42 (4%) Frame = -2 Query: 511 FSDMIEGM--NTRKSIYGNFQELYLYCYYVAGTVGLMSVPVM 392 F DMIEGM + RKS Y NF ELYLYCYYVAGTVGLMSVPVM Sbjct: 195 FKDMIEGMRLDLRKSRYNNFDELYLYCYYVAGTVGLMSVPVM 236 Score = 47.0 bits (110), Expect(2) = 2e-17 Identities = 22/37 (59%), Positives = 26/37 (70%) Frame = -3 Query: 381 LGIAPESPTLVHIIYDVALCLGIGTQLTNILRDIVED 271 +GIAPES +Y+ AL LGI QLTNILRD+ ED Sbjct: 236 MGIAPESKASTESVYNAALALGIANQLTNILRDVGED 272 >ref|XP_002297643.1| predicted protein [Populus trichocarpa] gi|222844901|gb|EEE82448.1| predicted protein [Populus trichocarpa] Length = 284 Score = 69.7 bits (169), Expect(2) = 2e-17 Identities = 35/42 (83%), Positives = 36/42 (85%), Gaps = 2/42 (4%) Frame = -2 Query: 511 FSDMIEGM--NTRKSIYGNFQELYLYCYYVAGTVGLMSVPVM 392 F DMIEGM +TRK Y NFQELYLYCYYVAGTVGLMSVPVM Sbjct: 98 FRDMIEGMRMDTRKFRYDNFQELYLYCYYVAGTVGLMSVPVM 139 Score = 45.8 bits (107), Expect(2) = 2e-17 Identities = 23/37 (62%), Positives = 26/37 (70%) Frame = -3 Query: 381 LGIAPESPTLVHIIYDVALCLGIGTQLTNILRDIVED 271 +GIA ES IY+ AL LGIG QLTNILRD+ ED Sbjct: 139 MGIAAESEASAQSIYNAALYLGIGNQLTNILRDVGED 175 >gb|AAV74394.1| phytoene synthase [Adonis aestivalis var. palaestina] Length = 401 Score = 67.4 bits (163), Expect(2) = 4e-17 Identities = 33/42 (78%), Positives = 35/42 (83%), Gaps = 2/42 (4%) Frame = -2 Query: 511 FSDMIEGM--NTRKSIYGNFQELYLYCYYVAGTVGLMSVPVM 392 F DMIEGM + +KS Y NF ELYLYCYYVAGTVGLMSVPVM Sbjct: 201 FKDMIEGMRLDLKKSRYNNFDELYLYCYYVAGTVGLMSVPVM 242 Score = 47.0 bits (110), Expect(2) = 4e-17 Identities = 22/37 (59%), Positives = 26/37 (70%) Frame = -3 Query: 381 LGIAPESPTLVHIIYDVALCLGIGTQLTNILRDIVED 271 +GIAPES +Y+ AL LGI QLTNILRD+ ED Sbjct: 242 MGIAPESQASTESVYNAALALGIANQLTNILRDVGED 278