BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028676
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3...   154   2e-35
ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3...   142   5e-32
ref|XP_004148950.1| PREDICTED: U-box domain-containing protein 3...   132   9e-29
ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus ...   108   8e-22
ref|NP_191039.2| U-box domain-containing protein 3 [Arabidopsis ...   103   3e-20

>ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3-like isoform 1 [Vitis
           vinifera]
          Length = 764

 Score =  154 bits (388), Expect = 2e-35
 Identities = 102/235 (43%), Positives = 130/235 (55%), Gaps = 7/235 (2%)
 Frame = -2

Query: 684 NASPLPIS-SNVPSQDFTRAESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCIEDNS 508
           N +P+P    +V +QD    +SFRC  +S+N T RSSLE G+  +K KV  S++   + S
Sbjct: 318 NITPVPSPLDHVSAQDVIGMDSFRCSIHSSNCTSRSSLEVGNGIEKLKVDVSTRFGGEES 377

Query: 507 KVIP-----KCDQSSPGQSYIHSRTXXXXXXXXXXEYLPPSFATNLHEASDLSSKHGHTS 343
            V       K ++ SP QSYIHSRT          + LP    T   E S +S+K  + +
Sbjct: 378 NVCKSREPEKLERQSPEQSYIHSRTESTSSAVSSIDSLP----TASTELSRISNKQENGT 433

Query: 342 EFFGEVTSNCSVSSPSKEAGFSPWLSGRKYHSSKTVTAVADNGS-NHQRSFSLPFSDSGF 166
              GE+TS+                       SKT   +  NG     R  SLPFSD  F
Sbjct: 434 GLSGEITSD-----------------------SKTKVEMVSNGKCGPPRILSLPFSDPKF 470

Query: 165 DDLTTSSHVEKLVEDLKVQCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLI 1
           DDLTTSSHVEKLVEDLK Q ++ QT AA+ELRLLAKHNM+NR+II  CGAI PL+
Sbjct: 471 DDLTTSSHVEKLVEDLKSQSNELQTVAASELRLLAKHNMENRIIIGRCGAIAPLV 525


>ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3-like isoform 2 [Vitis
           vinifera]
          Length = 757

 Score =  142 bits (359), Expect = 5e-32
 Identities = 98/235 (41%), Positives = 124/235 (52%), Gaps = 7/235 (2%)
 Frame = -2

Query: 684 NASPLPIS-SNVPSQDFTRAESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCIEDNS 508
           N +P+P    +V +QD    +SFRC  +S+N T RSSLE G+  +K KV  S++   + S
Sbjct: 318 NITPVPSPLDHVSAQDVIGMDSFRCSIHSSNCTSRSSLEVGNGIEKLKVDVSTRFGGEES 377

Query: 507 KVIP-----KCDQSSPGQSYIHSRTXXXXXXXXXXEYLPPSFATNLHEASDLSSKHGHTS 343
            V       K ++ SP QSYIHSRT          + LP    T   E S +S+K  + +
Sbjct: 378 NVCKSREPEKLERQSPEQSYIHSRTESTSSAVSSIDSLP----TASTELSRISNKQENGT 433

Query: 342 EFFGEVTSNCSVSSPSKEAGFSPWLSGRKYHSSKTVTAVADNGS-NHQRSFSLPFSDSGF 166
                                           SKT   +  NG     R  SLPFSD  F
Sbjct: 434 GL------------------------------SKTKVEMVSNGKCGPPRILSLPFSDPKF 463

Query: 165 DDLTTSSHVEKLVEDLKVQCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLI 1
           DDLTTSSHVEKLVEDLK Q ++ QT AA+ELRLLAKHNM+NR+II  CGAI PL+
Sbjct: 464 DDLTTSSHVEKLVEDLKSQSNELQTVAASELRLLAKHNMENRIIIGRCGAIAPLV 518


>ref|XP_004148950.1| PREDICTED: U-box domain-containing protein 3-like [Cucumis sativus]
            gi|449524836|ref|XP_004169427.1| PREDICTED: U-box
            domain-containing protein 3-like [Cucumis sativus]
          Length = 775

 Score =  132 bits (331), Expect = 9e-29
 Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 6/237 (2%)
 Frame = -2

Query: 693  NGNNASPLPISSNVPSQDFTRAESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCI-- 520
            N  N S L     +  Q+  R++SF    + +NST  SS E    S K+  GD   C+  
Sbjct: 306  NKLNFSSLSSLVQLSQQNLNRSDSFHYSVHGSNSTAGSSPEVEKGSDKQN-GDVFTCLVG 364

Query: 519  ----EDNSKVIPKCDQSSPGQSYIHSRTXXXXXXXXXXEYLPPSFATNLHEASDLSSKHG 352
                E       K DQ SP QSYI+SR+          +Y+P +F    +E   +S+KH 
Sbjct: 365  ENSNEGRRNGTEKFDQPSPQQSYIYSRSVSASSAFSSIDYIPSAF----NELLKVSNKHE 420

Query: 351  HTSEFFGEVTSNCSVSSPSKEAGFSPWLSGRKYHSSKTVTAVADNGSNHQRSFSLPFSDS 172
            +  E  GE+TS     S S+ +GF+  L   +  + KT T + +NG+++ R  SL   +S
Sbjct: 421  YIKELSGEITSEHPAKSHSEPSGFTSSLGDGQLQACKTETNMVENGNSNGRMDSLIPVES 480

Query: 171  GFDDLTTSSHVEKLVEDLKVQCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLI 1
              D+L+   H++KL+ DLK Q  + Q  AA ELRLLAK N++NR+II  CGAI PL+
Sbjct: 481  ESDNLSGDLHIKKLIADLKSQRDEVQMKAAEELRLLAKDNVENRVIIGQCGAIGPLL 537


>ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223528306|gb|EEF30352.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 753

 Score =  108 bits (271), Expect = 8e-22
 Identities = 80/229 (34%), Positives = 117/229 (51%), Gaps = 7/229 (3%)
 Frame = -2

Query: 666 ISSNVPSQDFTRAESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCIEDNS-----KV 502
           IS++VP+     ++S     +++NS  +SSLE G+  +K++V   SK   +       + 
Sbjct: 320 ISASVPADALQCSDSLHYSLHNSNSISKSSLEGGNGFEKQRVVFLSKLSREEPNGYQVQK 379

Query: 501 IPKCDQSSPGQSYIHSRTXXXXXXXXXXEYLPPSFATNLHEASDLSSKHGHTSEFFGEVT 322
           I   ++ S   SY HSR+          EY+PP      +E S +S KH   S+      
Sbjct: 380 IESFERPSHELSYNHSRSESTSSAISSIEYVPPI----ANEVSMVSRKHEKVSD------ 429

Query: 321 SNCSVSSPSKEAGFSPWLSGRKYHSSKTVTAVADNGSNHQ--RSFSLPFSDSGFDDLTTS 148
                S P  +A                     +  +NH+  R+ ++PF DSGFDDLTT+
Sbjct: 430 -----SIPKTKAD-------------------GEGNANHKLNRTRAVPFLDSGFDDLTTT 465

Query: 147 SHVEKLVEDLKVQCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLI 1
           SHVE L+E LK Q ++ Q TAA ELRLLAK+ M+NR+II   GAI PL+
Sbjct: 466 SHVECLIEGLKSQSNELQATAAEELRLLAKNKMENRIIIGRSGAITPLL 514


>ref|NP_191039.2| U-box domain-containing protein 3 [Arabidopsis thaliana]
           gi|172045742|sp|Q8GWV5.2|PUB3_ARATH RecName: Full=U-box
           domain-containing protein 3; AltName: Full=Plant U-box
           protein 3 gi|332645766|gb|AEE79287.1| U-box
           domain-containing protein 3 [Arabidopsis thaliana]
          Length = 760

 Score =  103 bits (258), Expect = 3e-20
 Identities = 81/236 (34%), Positives = 113/236 (47%), Gaps = 5/236 (2%)
 Frame = -2

Query: 693 NGNNASPLPISSNVPSQDFTRAESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDS-SKCIE 517
           +G +AS +  ++N+ SQDF R ESFR    S++ T RSSLE G+  +K K+  S S C E
Sbjct: 321 DGGDASSM--ANNMGSQDFNRTESFRFSLRSSSLTSRSSLETGNGFEKLKINVSASLCGE 378

Query: 516 DNSKVIPKCDQSSPGQSYIHSRTXXXXXXXXXXEYLPPSFATNLHEASDLSSKHGHTSEF 337
             SK +   +  SPGQSY HSR+          +Y+P    +  HE   +   H  +SE 
Sbjct: 379 SQSKDLEIFELLSPGQSYTHSRSESVCSVVSSVDYVP----SVTHETESILGNHQSSSEM 434

Query: 336 FGEVTSNCSVSSPSKEAGFSPWLSGRKYHSSKTVTAVADNGSNHQRSFSLPFSDSGFD-- 163
                      SP K    S                   N  NH+ S +  +  S  D  
Sbjct: 435 -----------SPKKNLESS-------------------NNVNHEHSAAKTYECSVHDLD 464

Query: 162 --DLTTSSHVEKLVEDLKVQCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLI 1
                T+SH  KLVEDLK   +  +T AAAE+R L  ++++NR+ I  CGAI PL+
Sbjct: 465 DSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLL 520