BLASTX nr result

ID: Coptis25_contig00028659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028659
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|2...   333   1e-89
ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|2...   333   2e-89
ref|XP_003522143.1| PREDICTED: sex determination protein tassels...   332   4e-89
ref|XP_003522142.1| PREDICTED: sex determination protein tassels...   332   4e-89
ref|XP_002265892.1| PREDICTED: sex determination protein tassels...   331   9e-89

>ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|222854216|gb|EEE91763.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  333 bits (855), Expect = 1e-89
 Identities = 166/220 (75%), Positives = 192/220 (87%)
 Frame = -1

Query: 677 IEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKHKSIIDFDVEEFDRVMNVNVKGVALG 498
           +EKD+ NLI++TIS+YG+LDI +NNAGVLGNQSK+KSI+DFDV+EFDRVM+VNV+G+ALG
Sbjct: 92  LEKDIENLINSTISQYGKLDILFNNAGVLGNQSKNKSIVDFDVDEFDRVMHVNVRGMALG 151

Query: 497 MKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYGIRVN 318
           +KHAARVM+ +  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYGIRVN
Sbjct: 152 IKHAARVMIPRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVN 211

Query: 317 CISPFGVATPMLINAWKKPXXXXXXXXDCMQVGRGSPYQEEVEKMEEFVRSLANLKGPTL 138
           CISPFGVAT ML+NAW+              +  G P ++EVEKME+FVR LANLKGPTL
Sbjct: 212 CISPFGVATSMLVNAWRSSGEEED------SLNFGLPSEKEVEKMEDFVRGLANLKGPTL 265

Query: 137 RPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 18
           R +DIAEAALYLASDES+YVSGHNLVVDGG+TTS NCVGL
Sbjct: 266 RARDIAEAALYLASDESKYVSGHNLVVDGGITTSTNCVGL 305


>ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|222867664|gb|EEF04795.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  333 bits (853), Expect = 2e-89
 Identities = 166/220 (75%), Positives = 192/220 (87%)
 Frame = -1

Query: 677 IEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKHKSIIDFDVEEFDRVMNVNVKGVALG 498
           +E+D+ NLI++T+S YG+LD+ +NNAGVLGNQSK+KSI++FD EEFDRVM VNV+GVALG
Sbjct: 92  LEEDIENLINSTVSHYGKLDVLFNNAGVLGNQSKNKSIVNFDAEEFDRVMQVNVRGVALG 151

Query: 497 MKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYGIRVN 318
           +KHAARVM+ +  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYGIRVN
Sbjct: 152 IKHAARVMIPRGVGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVN 211

Query: 317 CISPFGVATPMLINAWKKPXXXXXXXXDCMQVGRGSPYQEEVEKMEEFVRSLANLKGPTL 138
           CISPFGVAT ML+NAW+          DC+    G P ++EVEKME+FVR LANLKGPTL
Sbjct: 212 CISPFGVATSMLVNAWRS----GDEEEDCLNF--GLPCEKEVEKMEDFVRGLANLKGPTL 265

Query: 137 RPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 18
           R +DIAEAALYLASDES+YVSGHNLVVDGG+TTSRNCVGL
Sbjct: 266 RARDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCVGL 305


>ref|XP_003522143.1| PREDICTED: sex determination protein tasselseed-2-like isoform 2
           [Glycine max]
          Length = 293

 Score =  332 bits (851), Expect = 4e-89
 Identities = 168/221 (76%), Positives = 190/221 (85%), Gaps = 2/221 (0%)
 Frame = -1

Query: 674 EKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKHKSIIDFDVEEFDRVMNVNVKGVALGM 495
           E+++ NL+ +T+SRYGQLDI +NNAGVLGNQSK+KSII+FD EEFD+VM+VNVKG+ALG+
Sbjct: 73  EEEVENLVRSTVSRYGQLDIMFNNAGVLGNQSKNKSIINFDPEEFDKVMSVNVKGMALGI 132

Query: 494 KHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYGIRVNC 315
           KHAARVM+ K  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYGIRVNC
Sbjct: 133 KHAARVMIPKGIGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVNC 192

Query: 314 ISPFGVATPMLINAWKKPXXXXXXXXDCMQ--VGRGSPYQEEVEKMEEFVRSLANLKGPT 141
           ISPFGVAT ML+NAWK             +  +  G PYQEEVEKME FVR LANL+G T
Sbjct: 193 ISPFGVATNMLVNAWKSGGGDDDDDDQGDEGIINFGLPYQEEVEKMEGFVRGLANLQGAT 252

Query: 140 LRPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 18
           LR KDIAEAALYLASDES+YVSGHNLVVDGGVT+SRNC+GL
Sbjct: 253 LRAKDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 293


>ref|XP_003522142.1| PREDICTED: sex determination protein tasselseed-2-like isoform 1
           [Glycine max]
          Length = 311

 Score =  332 bits (851), Expect = 4e-89
 Identities = 168/221 (76%), Positives = 190/221 (85%), Gaps = 2/221 (0%)
 Frame = -1

Query: 674 EKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKHKSIIDFDVEEFDRVMNVNVKGVALGM 495
           E+++ NL+ +T+SRYGQLDI +NNAGVLGNQSK+KSII+FD EEFD+VM+VNVKG+ALG+
Sbjct: 91  EEEVENLVRSTVSRYGQLDIMFNNAGVLGNQSKNKSIINFDPEEFDKVMSVNVKGMALGI 150

Query: 494 KHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYGIRVNC 315
           KHAARVM+ K  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYGIRVNC
Sbjct: 151 KHAARVMIPKGIGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVNC 210

Query: 314 ISPFGVATPMLINAWKKPXXXXXXXXDCMQ--VGRGSPYQEEVEKMEEFVRSLANLKGPT 141
           ISPFGVAT ML+NAWK             +  +  G PYQEEVEKME FVR LANL+G T
Sbjct: 211 ISPFGVATNMLVNAWKSGGGDDDDDDQGDEGIINFGLPYQEEVEKMEGFVRGLANLQGAT 270

Query: 140 LRPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 18
           LR KDIAEAALYLASDES+YVSGHNLVVDGGVT+SRNC+GL
Sbjct: 271 LRAKDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 311


>ref|XP_002265892.1| PREDICTED: sex determination protein tasselseed-2-like [Vitis
           vinifera]
          Length = 303

 Score =  331 bits (848), Expect = 9e-89
 Identities = 167/220 (75%), Positives = 190/220 (86%)
 Frame = -1

Query: 677 IEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKHKSIIDFDVEEFDRVMNVNVKGVALG 498
           +E+D+ N+I++T+SRYG+LDI +NNAGVLGNQSKHKSIIDFD++EFD+VM VNV+G+ALG
Sbjct: 89  LEEDIENVINSTVSRYGRLDILFNNAGVLGNQSKHKSIIDFDIDEFDQVMRVNVRGMALG 148

Query: 497 MKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYGIRVN 318
           +KHAARVM+ +  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYGIRVN
Sbjct: 149 IKHAARVMVPRGMGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVN 208

Query: 317 CISPFGVATPMLINAWKKPXXXXXXXXDCMQVGRGSPYQEEVEKMEEFVRSLANLKGPTL 138
           CISPFGVAT ML+NAW+          DCM    G P + EVEKMEEFV  LANLKG  L
Sbjct: 209 CISPFGVATSMLVNAWRS---SDEEEEDCMNF--GIPCEREVEKMEEFVSGLANLKGHIL 263

Query: 137 RPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 18
           R KDIAEAALYLASDES+YVSGHNLVVDGG+TTSRNCVGL
Sbjct: 264 RAKDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCVGL 303


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