BLASTX nr result

ID: Coptis25_contig00028653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028653
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304372.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_003552985.1| PREDICTED: uncharacterized protein LOC100802...   204   5e-51
ref|XP_002263396.2| PREDICTED: uncharacterized protein At4g26485...   202   2e-50
ref|XP_003634764.1| PREDICTED: uncharacterized protein At4g26485...   199   1e-49
emb|CAN65240.1| hypothetical protein VITISV_043406 [Vitis vinifera]   199   3e-49

>ref|XP_002304372.1| predicted protein [Populus trichocarpa] gi|222841804|gb|EEE79351.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  206 bits (523), Expect = 2e-51
 Identities = 95/126 (75%), Positives = 108/126 (85%)
 Frame = -2

Query: 379 LGATIIHGVDATKMKRHTDLGMRQFDRIIFNFPHAGFHGKEDHVPMILKHRNLVRGFFKN 200
           L A+ +HGVDATKMK H DL MR+FDRIIFNFPHAGFHGKED++ +I KHRNLVRGFF+N
Sbjct: 81  LKASTLHGVDATKMKLHPDLRMRKFDRIIFNFPHAGFHGKEDNIKLIEKHRNLVRGFFRN 140

Query: 199 ASGMLRSNGEVHVNHKTTAPFNQWNLEELASIHKLRLIEHVEFKKDDYPGYNNKRGDSAR 20
           A  MLR++GE+HVNHKTTAPF  WN+EELA  + L LIE VEFK +DYPGYNNKRGDS R
Sbjct: 141 AKSMLRADGEIHVNHKTTAPFCHWNIEELARRNSLVLIERVEFKIEDYPGYNNKRGDSNR 200

Query: 19  CDEPFP 2
           CDEPFP
Sbjct: 201 CDEPFP 206


>ref|XP_003552985.1| PREDICTED: uncharacterized protein LOC100802899 [Glycine max]
          Length = 576

 Score =  204 bits (520), Expect = 5e-51
 Identities = 92/126 (73%), Positives = 111/126 (88%)
 Frame = -2

Query: 379 LGATIIHGVDATKMKRHTDLGMRQFDRIIFNFPHAGFHGKEDHVPMILKHRNLVRGFFKN 200
           LGA ++HGVDATKMK H+DL MR+FD++IFNFPHAGFHGKED+  +I KH+ LV GFFKN
Sbjct: 86  LGACLLHGVDATKMKLHSDLKMRRFDQVIFNFPHAGFHGKEDNTLLIKKHKALVLGFFKN 145

Query: 199 ASGMLRSNGEVHVNHKTTAPFNQWNLEELASIHKLRLIEHVEFKKDDYPGYNNKRGDSAR 20
           ASGMLR+NGE+HV+HKTTAPFN WN+E+LA+   L+LIE  +FK++DYPGYNNKRGDS R
Sbjct: 146 ASGMLRANGEIHVSHKTTAPFNNWNIEKLAAQCFLKLIECADFKREDYPGYNNKRGDSYR 205

Query: 19  CDEPFP 2
           CDEPFP
Sbjct: 206 CDEPFP 211


>ref|XP_002263396.2| PREDICTED: uncharacterized protein At4g26485 [Vitis vinifera]
          Length = 364

 Score =  202 bits (515), Expect = 2e-50
 Identities = 94/125 (75%), Positives = 109/125 (87%)
 Frame = -2

Query: 379 LGATIIHGVDATKMKRHTDLGMRQFDRIIFNFPHAGFHGKEDHVPMILKHRNLVRGFFKN 200
           LGA+++ GVDATKMK HTDL MR+FDRII+NFPHAGFHGKED+  MI  HR+LV GFF+N
Sbjct: 82  LGASLLFGVDATKMKLHTDLKMRKFDRIIYNFPHAGFHGKEDNRLMINMHRDLVHGFFRN 141

Query: 199 ASGMLRSNGEVHVNHKTTAPFNQWNLEELASIHKLRLIEHVEFKKDDYPGYNNKRGDSAR 20
           ASGMLR+NGE+HVNHKTTAPF+ WNLEELAS + L L E V+FKK+DYPGYNNKRG  +R
Sbjct: 142 ASGMLRANGEIHVNHKTTAPFSHWNLEELASQNSLVLFECVDFKKEDYPGYNNKRGAGSR 201

Query: 19  CDEPF 5
           CDEPF
Sbjct: 202 CDEPF 206


>ref|XP_003634764.1| PREDICTED: uncharacterized protein At4g26485-like [Vitis vinifera]
           gi|296090018|emb|CBI39837.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score =  199 bits (507), Expect = 1e-49
 Identities = 93/125 (74%), Positives = 108/125 (86%)
 Frame = -2

Query: 379 LGATIIHGVDATKMKRHTDLGMRQFDRIIFNFPHAGFHGKEDHVPMILKHRNLVRGFFKN 200
           LGA+++ GVDATKMK HTDL M +FDRII+NFPHAGFHGKED+  MI  HR+LV GFF+N
Sbjct: 82  LGASLLFGVDATKMKLHTDLKMWKFDRIIYNFPHAGFHGKEDNRLMINMHRDLVHGFFRN 141

Query: 199 ASGMLRSNGEVHVNHKTTAPFNQWNLEELASIHKLRLIEHVEFKKDDYPGYNNKRGDSAR 20
           ASGMLR+NGE+HVNHKTTAPF+ WNLEELAS + L L E V+FKK+DYPGYNNKRG  +R
Sbjct: 142 ASGMLRANGEIHVNHKTTAPFSHWNLEELASQNSLVLFECVDFKKEDYPGYNNKRGAGSR 201

Query: 19  CDEPF 5
           CDEPF
Sbjct: 202 CDEPF 206


>emb|CAN65240.1| hypothetical protein VITISV_043406 [Vitis vinifera]
          Length = 297

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/125 (74%), Positives = 107/125 (85%)
 Frame = -2

Query: 379 LGATIIHGVDATKMKRHTDLGMRQFDRIIFNFPHAGFHGKEDHVPMILKHRNLVRGFFKN 200
           LGA+++ GVDATKMK HTDL M +FDRII+NFPHAGFHGKED+  MI  HR+LV GFF+N
Sbjct: 15  LGASLLFGVDATKMKLHTDLKMWKFDRIIYNFPHAGFHGKEDNRLMINMHRDLVHGFFRN 74

Query: 199 ASGMLRSNGEVHVNHKTTAPFNQWNLEELASIHKLRLIEHVEFKKDDYPGYNNKRGDSAR 20
           ASGMLR+NGE+HVNHKTTAPF+ WNLEELAS   L L E V+FKK+DYPGYNNKRG  +R
Sbjct: 75  ASGMLRANGEIHVNHKTTAPFSHWNLEELASQDSLVLFECVDFKKEDYPGYNNKRGAGSR 134

Query: 19  CDEPF 5
           CDEPF
Sbjct: 135 CDEPF 139


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