BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028644
         (1626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   160   9e-37
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              160   9e-37
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   158   3e-36
ref|XP_002515641.1| RNA binding protein, putative [Ricinus commu...   152   3e-34
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   149   2e-33

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  160 bits (405), Expect = 9e-37
 Identities = 89/247 (36%), Positives = 147/247 (59%), Gaps = 9/247 (3%)
 Frame = -1

Query: 882  FKHIESSTVAGNSLSLVEFVDDHYDNARGYESDTHISVEGTTATHLSPSRHI--EACRSL 709
            F+ + S  VA NS        + ++ AR   S+       T +  + P+  I  +  +SL
Sbjct: 974  FEGMHSPGVADNSKLSPGQTVNQWNEARERPSEV------TQSPRIDPTGEIMLDLNQSL 1027

Query: 708  PFIKSSLLWESVESMEVFKILPQQPHFCPLEQYNEVAREGMAIGKMLIFANLLEKTGRVK 529
            PF+KSS +W ++E++EVF+ +PQ+PHF PLE   E  REG+AIG M+ F+ L+EK  +++
Sbjct: 1028 PFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLR 1087

Query: 528  VDEPRSTLEDKLEALMDIEECGFTVQPIRTRLEELLSIKDSINELDDKSKAIEREVSD-- 355
             D+PRS     LEAL+++E  GF  +P+++R+ EL+ IKD   +L  ++K +E ++ +  
Sbjct: 1088 FDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHT 1147

Query: 354  -EKLKYDEVEDSLEQLNMELQ----VLVMDKEMKDRNVAELQRTIDEIEENIEDVRSEFN 190
             EK K DE    +++  +ELQ    + V +KE KD  +A L  ++D + E+I+  R +F 
Sbjct: 1148 HEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQDFE 1207

Query: 189  RLVASPW 169
            R+  SPW
Sbjct: 1208 RVATSPW 1214


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  160 bits (405), Expect = 9e-37
 Identities = 89/247 (36%), Positives = 147/247 (59%), Gaps = 9/247 (3%)
 Frame = -1

Query: 882  FKHIESSTVAGNSLSLVEFVDDHYDNARGYESDTHISVEGTTATHLSPSRHI--EACRSL 709
            F+ + S  VA NS        + ++ AR   S+       T +  + P+  I  +  +SL
Sbjct: 834  FEGMHSPGVADNSKLSPGQTVNQWNEARERPSEV------TQSPRIDPTGEIMLDLNQSL 887

Query: 708  PFIKSSLLWESVESMEVFKILPQQPHFCPLEQYNEVAREGMAIGKMLIFANLLEKTGRVK 529
            PF+KSS +W ++E++EVF+ +PQ+PHF PLE   E  REG+AIG M+ F+ L+EK  +++
Sbjct: 888  PFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLR 947

Query: 528  VDEPRSTLEDKLEALMDIEECGFTVQPIRTRLEELLSIKDSINELDDKSKAIEREVSD-- 355
             D+PRS     LEAL+++E  GF  +P+++R+ EL+ IKD   +L  ++K +E ++ +  
Sbjct: 948  FDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHT 1007

Query: 354  -EKLKYDEVEDSLEQLNMELQ----VLVMDKEMKDRNVAELQRTIDEIEENIEDVRSEFN 190
             EK K DE    +++  +ELQ    + V +KE KD  +A L  ++D + E+I+  R +F 
Sbjct: 1008 HEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQDFE 1067

Query: 189  RLVASPW 169
            R+  SPW
Sbjct: 1068 RVATSPW 1074


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
            gi|223545236|gb|EEF46744.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 689

 Score =  158 bits (400), Expect = 3e-36
 Identities = 101/294 (34%), Positives = 160/294 (54%), Gaps = 11/294 (3%)
 Frame = -1

Query: 1017 SPAEEETPTSFPCLE----NSDAPMSENNGDQQLMPNVVINAVDASTHSFKHIESSTVAG 850
            +P + E   SFP  +    NS  P+S      +L P   IN  +  T+    + ++ V+ 
Sbjct: 411  TPPKGEDALSFPSKKLKKANSVKPLSSQACHAELTPIKTINQ-EMQTNCSTDLRNNVVSP 469

Query: 849  NSLSLVEFVDDHYDNARGYESDTHISVEGTTATHLSPSRHIEACRSLPFIKSSLLWESVE 670
             SLS  E           ++  + I+V   T         +     +PF+KSSL+W+++E
Sbjct: 470  LSLSKRE------RKVENFKQSSVINVPEAT--------ELVEDLEMPFLKSSLIWKNIE 515

Query: 669  SMEVFKILPQQPHFCPLEQYNEVAREGMAIGKMLIFANLLEKTGRVKVDEPRSTLEDKLE 490
            S+EVF++LPQ+PHF PL  + E +REGMA+G ML FA L+EK  +++VD+ R   E  +E
Sbjct: 516  SLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKLRVDDGREVFESYME 575

Query: 489  ALMDIEECGFTVQPIRTRLEELLSIKDSINELDDKSKAIE---REVSDEKLK----YDEV 331
             L ++E  GF V+ I  RLE+LLSIKD    L+D++K +     E  +EK+K     D++
Sbjct: 576  VLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKVHIGMAEGKNEKIKLEEDIDKI 635

Query: 330  EDSLEQLNMELQVLVMDKEMKDRNVAELQRTIDEIEENIEDVRSEFNRLVASPW 169
            E+ + QL  +  + V  K MKD  +  LQ   + + E+I ++  EF  + A+PW
Sbjct: 636  EERISQLEEQRAMKVSMKMMKDSELITLQVNANAVNEDIVNMEHEFENVAAAPW 689


>ref|XP_002515641.1| RNA binding protein, putative [Ricinus communis]
            gi|223545235|gb|EEF46743.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 683

 Score =  152 bits (383), Expect = 3e-34
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 20/312 (6%)
 Frame = -1

Query: 1044 IQTECTQLLSPAEEETPTSFPCLENSDAPMSENNGDQQLMPNVVINAVDASTHSFKHIES 865
            +QT C+  L    + +P     LEN      E   ++Q+   V    V A        E 
Sbjct: 383  MQTNCSTDLRNNVDPSPQD-ALLENKMTGYMEKR-ERQMSSKVTSQWVPAVG------EQ 434

Query: 864  STVAGNSLSLVEFVDDHYDNARGYESDTHISVEG-------------TTATHLSPSRHIE 724
            S +AGN  S ++F D   + A   E  T IS+E              ++  ++  +  + 
Sbjct: 435  SNIAGNGTSEIDFQDWATEEA---ELSTVISMEHLGKRERKVENFKQSSVINVPEATELV 491

Query: 723  ACRSLPFIKSSLLWESVESMEVFKILPQQPHFCPLEQYNEVAREGMAIGKMLIFANLLEK 544
                +PF KSSL+W+++ES+EVF++LPQ+PHF PL ++ E +REGMA+G ML FA L+EK
Sbjct: 492  ENLEMPFFKSSLIWKNIESLEVFQVLPQKPHFSPLIRHKEESREGMAMGHMLSFAVLIEK 551

Query: 543  TGRVKVDEPRSTLEDKLEALMDIEECGFTVQPIRTRLEELLSIKDSINELDDKSKAIE-- 370
              +++VD+ R   +  +E L D+E  GF V+ I   LE+LLSIKD    L+D++K +   
Sbjct: 552  MSKLQVDDGREVFDSYMEVLADLEMHGFQVEAIAECLEKLLSIKDRCKRLEDEAKKVHIG 611

Query: 369  -REVSDEKLKYDEVEDSLEQ----LNMELQVLVMDKEMKDRNVAELQRTIDEIEENIEDV 205
              E   EK+K +E  D +E+    L  +  + V  K MKD  +  LQ   + + E+I ++
Sbjct: 612  MAEGKHEKIKLEEDIDKIEKRISLLEEQRAMKVSMKMMKDSELITLQVNANAVNEDIVNM 671

Query: 204  RSEFNRLVASPW 169
              EF  +  +PW
Sbjct: 672  EHEFENVATAPW 683


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  149 bits (377), Expect = 2e-33
 Identities = 81/214 (37%), Positives = 134/214 (62%), Gaps = 9/214 (4%)
 Frame = -1

Query: 768  EGTTATHLSPSRHI--EACRSLPFIKSSLLWESVESMEVFKILPQQPHFCPLEQYNEVAR 595
            E T +  + P+  I  +  +SLPF+KSS +W ++E++EVF+ +PQ+PHF PLE   E  R
Sbjct: 988  EVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERR 1047

Query: 594  EGMAIGKMLIFANLLEKTGRVKVDEPRSTLEDKLEALMDIEECGFTVQPIRTRLEELLSI 415
            EG+AIG M+ F+ L+EK  +++ D+PRS     LEAL+++E  GF  +P+++R+ EL+ I
Sbjct: 1048 EGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFI 1107

Query: 414  KDSINELDDKSKAIEREVSD---EKLKYDEVEDSLEQLNMELQ----VLVMDKEMKDRNV 256
            KD   +L  ++K +E ++ +   EK K DE    +++  +ELQ    + V +KE KD  +
Sbjct: 1108 KDQQEQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEI 1167

Query: 255  AELQRTIDEIEENIEDVRSEFNRLVASPWWTSIG 154
            A L  + D + E+I+  R +F R  A+P ++  G
Sbjct: 1168 AALLSSADAMNESIQSARQDFER--ATPDFSDAG 1199