BLASTX nr result

ID: Coptis25_contig00028639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028639
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321011.1| multidrug resistance protein ABC transporter...   295   4e-78
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   290   1e-76
dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]       288   4e-76
ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis ...   288   4e-76
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   287   1e-75

>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  295 bits (755), Expect = 4e-78
 Identities = 140/201 (69%), Positives = 172/201 (85%)
 Frame = -1

Query: 611 KGYKSPLKIDDIASLAPDHEAEVISKLFESNWPKPSENSKHPVRTTLLRCFWKDFVFTAF 432
           KGYKSPLKIDD+ +L+P+H AE +S+LFES+WPKP E S HPVRTTLLRCFWK+  FTAF
Sbjct: 273 KGYKSPLKIDDVPTLSPEHRAEKMSQLFESSWPKPHEKSNHPVRTTLLRCFWKEISFTAF 332

Query: 431 LAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLLAKIIEVLSSHQFNFQSQT 252
           LA++RLSVMY+GP+L+Q FV ++SGK  SPYEG+YLV  LL+AK +EVL+ HQFNF S+ 
Sbjct: 333 LAILRLSVMYVGPMLIQSFVDYTSGKRTSPYEGYYLVLILLVAKFVEVLTDHQFNFNSRK 392

Query: 251 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 72
           +GMLIR  LIT+LYKKGL LS S+RQAHG+GQIVNYMAVDAQQLSDM+LQLH++WLMP Q
Sbjct: 393 LGMLIRCTLITSLYKKGLMLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHSIWLMPLQ 452

Query: 71  ILVALGLLYIYIGVSALSALL 9
           + V L LLY  +G SA++AL+
Sbjct: 453 VGVGLALLYNALGTSAVTALI 473


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  290 bits (743), Expect = 1e-76
 Identities = 139/203 (68%), Positives = 170/203 (83%)
 Frame = -1

Query: 611 KGYKSPLKIDDIASLAPDHEAEVISKLFESNWPKPSENSKHPVRTTLLRCFWKDFVFTAF 432
           KGYKSPLKID++ +L+P+H AE +S+LF + WPKP E SKHPVRTTLLRCFWK+  FTAF
Sbjct: 272 KGYKSPLKIDEVPTLSPEHRAERMSQLFAAKWPKPHEKSKHPVRTTLLRCFWKEIAFTAF 331

Query: 431 LAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLLAKIIEVLSSHQFNFQSQT 252
           LA++RL VMY+GP+L+Q FV ++SGK  SPYEG+YLV  LL+AK  EVL  HQFNF SQ 
Sbjct: 332 LAIMRLCVMYVGPLLIQSFVDYTSGKRTSPYEGYYLVLILLVAKFFEVLIVHQFNFNSQK 391

Query: 251 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 72
           +GMLIRS LIT+LY+KGL LS S+RQ+HG+GQIVNYMAVDAQQLSDM+LQLH +WLMP Q
Sbjct: 392 LGMLIRSTLITSLYRKGLRLSCSARQSHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQ 451

Query: 71  ILVALGLLYIYIGVSALSALLAI 3
           + VAL LLY  +GVS ++AL+ I
Sbjct: 452 VTVALVLLYNALGVSVIAALIGI 474


>dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]
          Length = 1516

 Score =  288 bits (738), Expect = 4e-76
 Identities = 135/203 (66%), Positives = 173/203 (85%)
 Frame = -1

Query: 611 KGYKSPLKIDDIASLAPDHEAEVISKLFESNWPKPSENSKHPVRTTLLRCFWKDFVFTAF 432
           KGYKSPL ++ + +L+P+H+AE ++ LFES+WPKPSENS HP+RTTLLRCFWK+ +FTA 
Sbjct: 272 KGYKSPLTLEQVPTLSPEHKAERLALLFESSWPKPSENSSHPIRTTLLRCFWKEILFTAI 331

Query: 431 LAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLLAKIIEVLSSHQFNFQSQT 252
           LA+VRL VMY+GPVL+Q FV F+SGK +SP++G+YLV  LL+AK +EVL++HQFNF SQ 
Sbjct: 332 LAIVRLGVMYVGPVLIQSFVDFTSGKRSSPWQGYYLVLILLVAKFVEVLTTHQFNFDSQK 391

Query: 251 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 72
           +GMLIRS LITALYKKGL L+ S+RQ HG+GQIVNYMAVDAQQLSDM+LQLH +WLMP Q
Sbjct: 392 LGMLIRSTLITALYKKGLKLTGSARQNHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQ 451

Query: 71  ILVALGLLYIYIGVSALSALLAI 3
           + VAL LLY  +G S ++A++ +
Sbjct: 452 VTVALVLLYGSLGASVITAVIGL 474


>ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis thaliana]
           gi|90103510|sp|Q7DM58.2|AB4C_ARATH RecName: Full=ABC
           transporter C family member 4; Short=ABC transporter
           ABCC.4; Short=AtABCC4; AltName: Full=ATP-energized
           glutathione S-conjugate pump 4; AltName:
           Full=Glutathione S-conjugate-transporting ATPase 4;
           AltName: Full=Multidrug resistance-associated protein 4
           gi|7716583|gb|AAF68441.1|AF243509_1 MRP4 [Arabidopsis
           thaliana] gi|2959767|emb|CAA05625.1| AtMRP4 [Arabidopsis
           thaliana] gi|3738292|gb|AAC63634.1|
           glutathione-conjugate transporter AtMRP4 [Arabidopsis
           thaliana] gi|330255795|gb|AEC10889.1| ABC transporter C
           family member 4 [Arabidopsis thaliana]
          Length = 1516

 Score =  288 bits (738), Expect = 4e-76
 Identities = 135/203 (66%), Positives = 173/203 (85%)
 Frame = -1

Query: 611 KGYKSPLKIDDIASLAPDHEAEVISKLFESNWPKPSENSKHPVRTTLLRCFWKDFVFTAF 432
           KGYKSPL ++ + +L+P+H+AE ++ LFES+WPKPSENS HP+RTTLLRCFWK+ +FTA 
Sbjct: 272 KGYKSPLTLEQVPTLSPEHKAERLALLFESSWPKPSENSSHPIRTTLLRCFWKEILFTAI 331

Query: 431 LAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLLAKIIEVLSSHQFNFQSQT 252
           LA+VRL VMY+GPVL+Q FV F+SGK +SP++G+YLV  LL+AK +EVL++HQFNF SQ 
Sbjct: 332 LAIVRLGVMYVGPVLIQSFVDFTSGKRSSPWQGYYLVLILLVAKFVEVLTTHQFNFDSQK 391

Query: 251 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 72
           +GMLIRS LITALYKKGL L+ S+RQ HG+GQIVNYMAVDAQQLSDM+LQLH +WLMP Q
Sbjct: 392 LGMLIRSTLITALYKKGLKLTGSARQNHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQ 451

Query: 71  ILVALGLLYIYIGVSALSALLAI 3
           + VAL LLY  +G S ++A++ +
Sbjct: 452 VTVALVLLYGSLGASVITAVIGL 474


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1525

 Score =  287 bits (734), Expect = 1e-75
 Identities = 134/203 (66%), Positives = 174/203 (85%)
 Frame = -1

Query: 611 KGYKSPLKIDDIASLAPDHEAEVISKLFESNWPKPSENSKHPVRTTLLRCFWKDFVFTAF 432
           KGYKSPL ++++ +L+P+H+AE +++LFES+WPKPSENS HPVRTTLLRCFWK+ ++TA 
Sbjct: 278 KGYKSPLTLEEVPTLSPEHKAERLARLFESSWPKPSENSSHPVRTTLLRCFWKEILYTAI 337

Query: 431 LAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLLAKIIEVLSSHQFNFQSQT 252
           LA+VRL VMY+GPVL+Q FV F+SGK +S ++G+YLV  LL+AK +EVL++HQFNF SQ 
Sbjct: 338 LAIVRLGVMYVGPVLIQSFVDFTSGKRSSSWQGYYLVLILLVAKFVEVLTTHQFNFDSQK 397

Query: 251 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 72
           +GMLIRS LITALYKKGL L+ S+RQ HG+GQIVNYMAVDAQQLSDM+LQLH +WLMP Q
Sbjct: 398 LGMLIRSTLITALYKKGLKLTGSARQNHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQ 457

Query: 71  ILVALGLLYIYIGVSALSALLAI 3
           + VAL LLY  +G S ++A++ +
Sbjct: 458 VTVALVLLYGSLGASVITAVIGL 480


Top