BLASTX nr result

ID: Coptis25_contig00028634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028634
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536248.1| PREDICTED: auxin-induced protein 5NG4 [Glyci...    68   9e-10
gb|ACU17080.1| unknown [Glycine max]                                   68   9e-10
ref|XP_003556351.1| PREDICTED: auxin-induced protein 5NG4-like [...    67   1e-09
ref|XP_002280977.1| PREDICTED: auxin-induced protein 5NG4 [Vitis...    65   4e-09
emb|CBI37093.3| unnamed protein product [Vitis vinifera]               65   6e-09

>ref|XP_003536248.1| PREDICTED: auxin-induced protein 5NG4 [Glycine max]
          Length = 354

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -2

Query: 260 VSVTLNMYFASLGYTSPTFIASMVNTIASLTFIITVVLR 144
           VSVTLNMYFASL YT+PTF+ASM+NTIASLTFII V LR
Sbjct: 91  VSVTLNMYFASLKYTNPTFVASMINTIASLTFIIAVALR 129


>gb|ACU17080.1| unknown [Glycine max]
          Length = 175

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -2

Query: 260 VSVTLNMYFASLGYTSPTFIASMVNTIASLTFIITVVLR 144
           VSVTLNMYFASL YT+PTF+ASM+NTIASLTFII V LR
Sbjct: 91  VSVTLNMYFASLKYTNPTFVASMINTIASLTFIIAVALR 129


>ref|XP_003556351.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 210

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -2

Query: 260 VSVTLNMYFASLGYTSPTFIASMVNTIASLTFIITVVL 147
           VSVTLNMYFASL YT+PTF+ASMVNTIASLTFII V L
Sbjct: 91  VSVTLNMYFASLNYTNPTFVASMVNTIASLTFIIAVAL 128


>ref|XP_002280977.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
           gi|296083618|emb|CBI23607.3| unnamed protein product
           [Vitis vinifera]
          Length = 368

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -2

Query: 260 VSVTLNMYFASLGYTSPTFIASMVNTIASLTFIITVVLR 144
           V ++LNMYFASL YTSPTFIAS+VNTIASLTFII VVLR
Sbjct: 91  VGLSLNMYFASLRYTSPTFIASVVNTIASLTFIIAVVLR 129


>emb|CBI37093.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -2

Query: 260 VSVTLNMYFASLGYTSPTFIASMVNTIASLTFIITVVLR 144
           + +TLNMYFASL YTSPTF+ASMVNTIASLTF++ ++LR
Sbjct: 97  IGLTLNMYFASLTYTSPTFLASMVNTIASLTFVMAIILR 135


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