BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028597
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi...   247   8e-64
ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-62
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar...   230   1e-58
ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ...   227   7e-58

>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  247 bits (630), Expect = 8e-64
 Identities = 114/144 (79%), Positives = 130/144 (90%)
 Frame = +2

Query: 2   QNVHKIKPTHSHYSCMIDLFGRAGLLQQAHNFIEKMPVEPDVIAWGSLLSSCKVHKNVEL 181
           QN HKI PT SHY+CMIDLFGRAGLLQ+AH FIE MP+EPDVIAWGSLL+SCKVHKNVEL
Sbjct: 541 QNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVEL 600

Query: 182 AKIAAERLLLIDPENSGAYSALANAYSACGKWDDAARIRRLMKDRGVKKDQGSSWIQIKN 361
           A++AAERLLLI+PENSGAYSALAN YSACG+W++AA IR+ MKD+GVKKDQG SW+QIKN
Sbjct: 601 AEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKN 660

Query: 362 KVHVFGAEDGSHPQKDVIYITMAK 433
           KVH+FG +DG HPQ+D IY  MAK
Sbjct: 661 KVHIFGVDDGLHPQRDAIYEMMAK 684


>ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|222853495|gb|EEE91042.1|
           predicted protein [Populus trichocarpa]
          Length = 747

 Score =  241 bits (616), Expect = 3e-62
 Identities = 112/144 (77%), Positives = 129/144 (89%)
 Frame = +2

Query: 2   QNVHKIKPTHSHYSCMIDLFGRAGLLQQAHNFIEKMPVEPDVIAWGSLLSSCKVHKNVEL 181
           +NVHKI PT SHY+CM+DLFGRAGLLQ+A+ F+E MP+EPDVIAWGSLLSSCKV+KNV+L
Sbjct: 503 KNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDL 562

Query: 182 AKIAAERLLLIDPENSGAYSALANAYSACGKWDDAARIRRLMKDRGVKKDQGSSWIQIKN 361
           AK+AAERLLLI+P NSGAYSALAN YS+CGKWDDAA+IR+LMK RGVKK+QG SW+QI+N
Sbjct: 563 AKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQN 622

Query: 362 KVHVFGAEDGSHPQKDVIYITMAK 433
           K HVFG EDG HPQKD IY  M K
Sbjct: 623 KTHVFGVEDGLHPQKDEIYKMMDK 646


>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 786

 Score =  230 bits (586), Expect = 1e-58
 Identities = 103/144 (71%), Positives = 129/144 (89%)
 Frame = +2

Query: 2   QNVHKIKPTHSHYSCMIDLFGRAGLLQQAHNFIEKMPVEPDVIAWGSLLSSCKVHKNVEL 181
           ++V KI PT SHY+CM+DLFGRAGLLQ+A  FIEKMP+EPDV+ WGSLLS+C+VHKN++L
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601

Query: 182 AKIAAERLLLIDPENSGAYSALANAYSACGKWDDAARIRRLMKDRGVKKDQGSSWIQIKN 361
            K+AAERLLL++PENSGAYSALAN YSACGKW++AA+IR+ MKD  VKK+QG SWI++K+
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661

Query: 362 KVHVFGAEDGSHPQKDVIYITMAK 433
           KVHVFG EDG+HP+K+ IY+TM K
Sbjct: 662 KVHVFGVEDGTHPEKNEIYMTMKK 685


>ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  229 bits (584), Expect = 2e-58
 Identities = 102/144 (70%), Positives = 125/144 (86%)
 Frame = +2

Query: 2   QNVHKIKPTHSHYSCMIDLFGRAGLLQQAHNFIEKMPVEPDVIAWGSLLSSCKVHKNVEL 181
           +NVH I+PT SHY+CMIDL GRAGLL++A+NFI  MP+EPDV+AWGSLLSSC+VHK V+L
Sbjct: 541 KNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDL 600

Query: 182 AKIAAERLLLIDPENSGAYSALANAYSACGKWDDAARIRRLMKDRGVKKDQGSSWIQIKN 361
           AK+AAE+LLLIDP NSGAY ALAN  SACGKW+DAA++R+ MKD+ VKK+QG SW+QIKN
Sbjct: 601 AKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKN 660

Query: 362 KVHVFGAEDGSHPQKDVIYITMAK 433
           KVH+FG ED  HPQ+D IY  ++K
Sbjct: 661 KVHIFGVEDALHPQRDAIYCMISK 684


>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324425|gb|EFH54845.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 786

 Score =  227 bits (579), Expect = 7e-58
 Identities = 103/144 (71%), Positives = 127/144 (88%)
 Frame = +2

Query: 2   QNVHKIKPTHSHYSCMIDLFGRAGLLQQAHNFIEKMPVEPDVIAWGSLLSSCKVHKNVEL 181
           ++V KI PT SHY+CM+DLFGRAGLLQ+A  FIEKMP+EPDV+ WGSLLS+C+V+KN++L
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDL 601

Query: 182 AKIAAERLLLIDPENSGAYSALANAYSACGKWDDAARIRRLMKDRGVKKDQGSSWIQIKN 361
            K+AAERLLL++PENSGAYSALAN YSACGKW++AA+IR+ MKD  VKK+QG SWI++K+
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661

Query: 362 KVHVFGAEDGSHPQKDVIYITMAK 433
           KVH FG EDG HPQK+ IYITM K
Sbjct: 662 KVHAFGVEDGIHPQKNEIYITMKK 685