BLASTX nr result

ID: Coptis25_contig00028594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028594
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24880.3| unnamed protein product [Vitis vinifera]               45   6e-07

>emb|CBI24880.3| unnamed protein product [Vitis vinifera]
          Length = 1108

 Score = 45.4 bits (106), Expect(2) = 6e-07
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +3

Query: 264 VDLLTTSAWSLFQERIGDDVMVHLLKFVSI 353
           V+LLT+SAW L  ER+GDD+MV+LLK  SI
Sbjct: 134 VELLTSSAWGLLLERVGDDIMVYLLKHTSI 163



 Score = 32.7 bits (73), Expect(2) = 6e-07
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +2

Query: 116 QIVRRTIEAIMGDVQVSRKNVLCNGYNK 199
           QIVR+TIE IM + Q    NVLC GY+K
Sbjct: 100 QIVRKTIEMIMCE-QPGSSNVLCGGYSK 126


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