BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028586
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   220   1e-55
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor...   216   2e-54
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216...   216   2e-54
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   216   2e-54

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  220 bits (560), Expect = 1e-55
 Identities = 110/119 (92%), Positives = 114/119 (95%)
 Frame = +3

Query: 3    RTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 182
            RTGPGKCYRLYTESAY NEMS TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ
Sbjct: 852  RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 911

Query: 183  ALISAMEQLYSLGALNDEGALTNLGKKMADFPLDPPLSKMLLASVDLRCSDEILTIIAM 359
            ALISAMEQLYSLGAL++EG LT LG+KMA+FPLDPPLSKMLLASVDL CSDEILTIIAM
Sbjct: 912  ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 970


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
            predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  219 bits (557), Expect = 2e-55
 Identities = 109/119 (91%), Positives = 114/119 (95%)
 Frame = +3

Query: 3    RTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 182
            RTGPGKCYRLYTESAY NEMS TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ
Sbjct: 846  RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 905

Query: 183  ALISAMEQLYSLGALNDEGALTNLGKKMADFPLDPPLSKMLLASVDLRCSDEILTIIAM 359
            ALISAMEQLYSLGAL++EG LT LG+KMA+FPLDPPLSKMLLASVDL CSDEILT+IAM
Sbjct: 906  ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTMIAM 964


>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Cucumis sativus]
          Length = 1181

 Score =  216 bits (550), Expect = 2e-54
 Identities = 108/119 (90%), Positives = 113/119 (94%)
 Frame = +3

Query: 3    RTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 182
            RTGPGKCYRLYTESAY NEMS T+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQ
Sbjct: 856  RTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQ 915

Query: 183  ALISAMEQLYSLGALNDEGALTNLGKKMADFPLDPPLSKMLLASVDLRCSDEILTIIAM 359
            ALISAMEQLYSLGAL++EG LT LG+KMA+FPLDPPLSKMLLASVDL CSDEILTIIAM
Sbjct: 916  ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 974


>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
          Length = 1218

 Score =  216 bits (550), Expect = 2e-54
 Identities = 108/119 (90%), Positives = 113/119 (94%)
 Frame = +3

Query: 3    RTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 182
            RTGPGKCYRLYTESAY NEMS T+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQ
Sbjct: 893  RTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQ 952

Query: 183  ALISAMEQLYSLGALNDEGALTNLGKKMADFPLDPPLSKMLLASVDLRCSDEILTIIAM 359
            ALISAMEQLYSLGAL++EG LT LG+KMA+FPLDPPLSKMLLASVDL CSDEILTIIAM
Sbjct: 953  ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 1011


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  216 bits (549), Expect = 2e-54
 Identities = 107/119 (89%), Positives = 113/119 (94%)
 Frame = +3

Query: 3    RTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 182
            RTGPGKCYRLYTESAY NEMS TS+PEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQ
Sbjct: 847  RTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQ 906

Query: 183  ALISAMEQLYSLGALNDEGALTNLGKKMADFPLDPPLSKMLLASVDLRCSDEILTIIAM 359
            ALISAMEQLYSLGAL++EG LT LG+KMA+FPL+PPLSKMLLASVDL CSDEILTIIAM
Sbjct: 907  ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTIIAM 965