BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028584
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]        129   3e-28
ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata] gi...   127   9e-28
ref|XP_003539190.1| PREDICTED: DNA ligase 1-like [Glycine max]        126   2e-27
ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera] gi|...   126   2e-27
ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium d...   126   2e-27

>ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
          Length = 776

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/68 (89%), Positives = 63/68 (92%)
 Frame = +3

Query: 3   DAAVNSGCEGLIIKTLNGDATYEPSKRSLNWLKLKKDYMDGVGDSLDLVPIAAFHGRGKR 182
           D AV + CEGLIIKTLN DATYEPSKRSLNWLKLKKDYMD +GDSLDLVPIAAFHGRGKR
Sbjct: 573 DQAVGASCEGLIIKTLNEDATYEPSKRSLNWLKLKKDYMDSIGDSLDLVPIAAFHGRGKR 632

Query: 183 TGVYGAFL 206
           TGVYGAFL
Sbjct: 633 TGVYGAFL 640


>ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338280|gb|EFH68697.1| ATLIG1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 793

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = +3

Query: 3   DAAVNSGCEGLIIKTLNGDATYEPSKRSLNWLKLKKDYMDGVGDSLDLVPIAAFHGRGKR 182
           DA+V+ GCEGLIIKTLN DATYEP+KRS NWLKLKKDYMD +GDS+DLVPIAAFHGRGKR
Sbjct: 591 DASVDVGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSMDLVPIAAFHGRGKR 650

Query: 183 TGVYGAFL 206
           TGVYGAFL
Sbjct: 651 TGVYGAFL 658


>ref|XP_003539190.1| PREDICTED: DNA ligase 1-like [Glycine max]
          Length = 701

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/68 (88%), Positives = 62/68 (91%)
 Frame = +3

Query: 3   DAAVNSGCEGLIIKTLNGDATYEPSKRSLNWLKLKKDYMDGVGDSLDLVPIAAFHGRGKR 182
           D AV + CEGLIIKTLN DATYEP KRSLNWLKLKKDYMD +GDSLDLVPIAAFHGRGKR
Sbjct: 524 DQAVGASCEGLIIKTLNEDATYEPLKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKR 583

Query: 183 TGVYGAFL 206
           TGVYGAFL
Sbjct: 584 TGVYGAFL 591


>ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
           gi|297734904|emb|CBI17138.3| unnamed protein product
           [Vitis vinifera]
          Length = 723

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = +3

Query: 3   DAAVNSGCEGLIIKTLNGDATYEPSKRSLNWLKLKKDYMDGVGDSLDLVPIAAFHGRGKR 182
           +AAV++ CEGLIIKTLNGDATYEPSKRS NWLKLKKDYM+ +GDSLDLVPIAAFHGRGKR
Sbjct: 521 EAAVDTSCEGLIIKTLNGDATYEPSKRSHNWLKLKKDYMENIGDSLDLVPIAAFHGRGKR 580

Query: 183 TGVYGAFL 206
            GVYGAFL
Sbjct: 581 AGVYGAFL 588


>ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon]
          Length = 918

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/68 (88%), Positives = 63/68 (92%)
 Frame = +3

Query: 3   DAAVNSGCEGLIIKTLNGDATYEPSKRSLNWLKLKKDYMDGVGDSLDLVPIAAFHGRGKR 182
           D AVNS CEGLIIKTL+ DATYEP+KRS NWLKLKKDYMD VGDSLDLVPIAAFHGRGKR
Sbjct: 714 DVAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSVGDSLDLVPIAAFHGRGKR 773

Query: 183 TGVYGAFL 206
           TGVYG+FL
Sbjct: 774 TGVYGSFL 781