BLASTX nr result

ID: Coptis25_contig00028582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028582
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17922.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ...    74   1e-11
emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera]    74   1e-11
ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like ...    59   3e-07

>emb|CBI17922.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +2

Query: 119 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259
           + FW   IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLE
Sbjct: 8   LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLE 51


>ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera]
          Length = 674

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +2

Query: 119 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259
           + FW   IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLE
Sbjct: 80  LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLE 123


>emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera]
          Length = 246

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +2

Query: 119 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259
           + FW   IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLE
Sbjct: 124 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLE 167


>ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|222856260|gb|EEE93807.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
 Frame = +2

Query: 119 MKFWTWVIF----LCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259
           MK   W++F    LC F SGS SI +F +AFPI+EPD  HTKL L+ EGLE
Sbjct: 1   MKISRWILFYWLFLCVFASGSLSIDNFNRAFPIIEPDPNHTKLHLASEGLE 51


>ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like [Glycine max]
          Length = 601

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = +2

Query: 140 IFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259
           +FL    S SSSI +F QAFPIVEPD GHTKLRLSREGLE
Sbjct: 13  LFLSPTPSSSSSIDNFHQAFPIVEPDPGHTKLRLSREGLE 52


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