BLASTX nr result
ID: Coptis25_contig00028582
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028582 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17922.3| unnamed protein product [Vitis vinifera] 74 1e-11 ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ... 74 1e-11 emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera] 74 1e-11 ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like ... 59 3e-07 >emb|CBI17922.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 74.3 bits (181), Expect = 1e-11 Identities = 36/47 (76%), Positives = 39/47 (82%) Frame = +2 Query: 119 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259 + FW IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLE Sbjct: 8 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLE 51 >ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera] Length = 674 Score = 74.3 bits (181), Expect = 1e-11 Identities = 36/47 (76%), Positives = 39/47 (82%) Frame = +2 Query: 119 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259 + FW IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLE Sbjct: 80 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLE 123 >emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera] Length = 246 Score = 74.3 bits (181), Expect = 1e-11 Identities = 36/47 (76%), Positives = 39/47 (82%) Frame = +2 Query: 119 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259 + FW IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLE Sbjct: 124 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLE 167 >ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|222856260|gb|EEE93807.1| predicted protein [Populus trichocarpa] Length = 663 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 4/51 (7%) Frame = +2 Query: 119 MKFWTWVIF----LCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259 MK W++F LC F SGS SI +F +AFPI+EPD HTKL L+ EGLE Sbjct: 1 MKISRWILFYWLFLCVFASGSLSIDNFNRAFPIIEPDPNHTKLHLASEGLE 51 >ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like [Glycine max] Length = 601 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/40 (75%), Positives = 32/40 (80%) Frame = +2 Query: 140 IFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLE 259 +FL S SSSI +F QAFPIVEPD GHTKLRLSREGLE Sbjct: 13 LFLSPTPSSSSSIDNFHQAFPIVEPDPGHTKLRLSREGLE 52