BLASTX nr result

ID: Coptis25_contig00028574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028574
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548788.1| PREDICTED: uncharacterized protein LOC100798...    60   2e-07
tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    60   2e-07
ref|XP_003551277.1| PREDICTED: uncharacterized protein LOC100797...    60   2e-07
tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea m...    59   3e-07
gb|AFW68609.1| hypothetical protein ZEAMMB73_777129 [Zea mays]         59   3e-07

>ref|XP_003548788.1| PREDICTED: uncharacterized protein LOC100798063 [Glycine max]
          Length = 238

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   LDTLREQLLLGNKGQGGWKVVAYTAVVNNVLHICIMKITSTNARNRLKTWKKIVSRVQ*L 181
           +D LR+Q  LGNKG G WK VAY+     +     + + + N +NR K W+     V  +
Sbjct: 9   VDVLRDQRNLGNKGDGNWKTVAYSTATQILSKHFGVHLMADNVKNRFKLWRTWYGIVSDI 68

Query: 182 LGLSDFGWDDCKKTVTAD-ESVWADALK 262
           L  S F WD  K  +T + E  W + +K
Sbjct: 69  LSQSGFDWDSTKYMITVENEIAWNEYVK 96


>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   LDTLREQLLLGNKGQGGWKVVAYTAVVNNVLHICIMKITSTNARNRLKTWKKIVSRVQ*L 181
           LDT  +    G++ Q GWK   YTAVV NV   C + IT  N  +R KT+ K  + +  L
Sbjct: 23  LDTFVDYYNKGDRCQNGWKSHVYTAVVKNVCEKCNVTITKENISSRSKTFDKHYNIINGL 82

Query: 182 LGLSDFGWDDCKKTVTAD-ESVWADALK 262
           L  S FGWD  K  +  D ++VW + ++
Sbjct: 83  LSTSGFGWDWEKNKLKVDSDTVWDEYIE 110


>ref|XP_003551277.1| PREDICTED: uncharacterized protein LOC100797937 [Glycine max]
          Length = 604

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   DTLREQLLLGNKGQGGWKVVAYTAVVNNVLHICIMKITSTNARNRLKTWKKIVSRVQ*LL 184
           D LR+Q  LGNKG G WK VAY+     +     + + + N +NR K W+     V  +L
Sbjct: 347 DVLRDQRNLGNKGDGNWKAVAYSTAAQILSKRFGVHLMADNVKNRFKLWRTWYGIVSDIL 406

Query: 185 GLSDFGWDDCKKTVTAD-ESVWADALK 262
             S F WD  K  +T + E  W + +K
Sbjct: 407 SQSGFDWDSTKYMITVENEIAWNEYVK 433


>tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea mays]
          Length = 206

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   LDTLREQLLLGNKGQGGWKVVAYTAVVNNVLHICIMKITSTNARNRLKTWKKIVSRVQ*L 181
           LDT  E    G++ Q GWK   YTA + NV   C ++IT  N  +R KT+ K  + +  +
Sbjct: 25  LDTFVEYYNKGDRCQNGWKSHVYTAAIKNVREKCNVEITKDNIMSRNKTFDKHHTIINGM 84

Query: 182 LGLSDFGWDDCKKTVTAD-ESVW 247
           L  S FGWD  K  ++ D +SVW
Sbjct: 85  LETSGFGWDWNKNKISVDSDSVW 107


>gb|AFW68609.1| hypothetical protein ZEAMMB73_777129 [Zea mays]
          Length = 290

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   LDTLREQLLLGNKGQGGWKVVAYTAVVNNVLHICIMKITSTNARNRLKTWKKIVSRVQ*L 181
           LDT  E    G++ Q GWK   YTA + NV   C ++IT  N  +R KT+ K  + +  +
Sbjct: 6   LDTFVEYYNKGDRCQNGWKSHVYTAAIKNVREKCNVEITKDNIMSRNKTFDKHHTIINGM 65

Query: 182 LGLSDFGWDDCKKTVTAD-ESVW 247
           L  S FGWD  K  ++ D +SVW
Sbjct: 66  LQTSGFGWDWNKNKISVDSDSVW 88


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