BLASTX nr result

ID: Coptis25_contig00028570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028570
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526461.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002331112.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002328774.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_003592931.1| DMI1 protein [Medicago truncatula] gi|622865...    70   2e-10
gb|ABX57727.1| SYM8 [Pisum sativum]                                    70   2e-10

>ref|XP_002526461.1| conserved hypothetical protein [Ricinus communis]
           gi|223534241|gb|EEF35956.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 889

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -3

Query: 243 IRGRQRQEIVIGYRLTDADRAVINPVNKALQRKWSLDDVFVVISLGE 103
           IRGRQR EIVIGYRL  A+RA+INP  K+  +KWSLDDVFVVISLGE
Sbjct: 843 IRGRQRNEIVIGYRLATAERAIINPPEKSKLKKWSLDDVFVVISLGE 889


>ref|XP_002331112.1| predicted protein [Populus trichocarpa] gi|222872840|gb|EEF09971.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -3

Query: 243 IRGRQRQEIVIGYRLTDADRAVINPVNKALQRKWSLDDVFVVIS 112
           IRGRQR EIVIGYRL +A+RA+INP  K+  RKWSLDDVFVVIS
Sbjct: 650 IRGRQRNEIVIGYRLANAERAIINPPEKSEPRKWSLDDVFVVIS 693


>ref|XP_002328774.1| predicted protein [Populus trichocarpa] gi|222839072|gb|EEE77423.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = -3

Query: 243 IRGRQRQEIVIGYRLTDADRAVINPVNKALQRKWSLDDVFVVISLGE 103
           IRGRQR EIVIG+RL +A+RA+INP  K   RKWSL DVFVVISLG+
Sbjct: 665 IRGRQRNEIVIGFRLANAERAIINPPEKLQPRKWSLADVFVVISLGD 711


>ref|XP_003592931.1| DMI1 protein [Medicago truncatula]
           gi|62286545|sp|Q6RHR6.1|DMI1_MEDTR RecName: Full=Ion
           channel DMI1; AltName: Full=Does not make infections
           protein 1 gi|44953222|gb|AAS49490.1| DMI1 protein
           [Medicago truncatula] gi|92870250|gb|ABE79577.1| Ion
           channel DMI-1 , putative [Medicago truncatula]
           gi|355481979|gb|AES63182.1| DMI1 protein [Medicago
           truncatula] gi|357394659|gb|AET75788.1| DMI1 [Cloning
           vector pHUGE-MtNFS] gi|357394672|gb|AET75800.1| DMI1
           [Cloning vector pHUGE-LjMtNFS]
          Length = 882

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/47 (68%), Positives = 40/47 (85%)
 Frame = -3

Query: 243 IRGRQRQEIVIGYRLTDADRAVINPVNKALQRKWSLDDVFVVISLGE 103
           IRGR R+EIVIGYRL + +RA+INP  K++ RKWSLDDVFVV++ GE
Sbjct: 836 IRGRTRKEIVIGYRLANQERAIINPSEKSVPRKWSLDDVFVVLASGE 882


>gb|ABX57727.1| SYM8 [Pisum sativum]
          Length = 894

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = -3

Query: 243 IRGRQRQEIVIGYRLTDADRAVINPVNKALQRKWSLDDVFVVISLGE 103
           IRGR R+EIVIGYRL   +RA+INP  K++ RKWSLDDVFVVI+ GE
Sbjct: 848 IRGRTRKEIVIGYRLASQERALINPSEKSMTRKWSLDDVFVVIASGE 894


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