BLASTX nr result

ID: Coptis25_contig00028554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028554
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282518.1| PREDICTED: uncharacterized protein LOC100251...   184   5e-44
ref|XP_002266422.1| PREDICTED: uncharacterized protein LOC100241...   182   2e-43
gb|ACU20832.1| unknown [Glycine max]                                  176   8e-42
ref|XP_003535982.1| PREDICTED: uncharacterized protein LOC100797...   176   1e-41
ref|XP_002315598.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-40

>ref|XP_002282518.1| PREDICTED: uncharacterized protein LOC100251153 [Vitis vinifera]
           gi|296088262|emb|CBI35770.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  184 bits (466), Expect = 5e-44
 Identities = 103/255 (40%), Positives = 139/255 (54%), Gaps = 5/255 (1%)
 Frame = +3

Query: 213 WDSNAETFRXXXXXXXXXXXXXXXXXXXXXXXXXXTWRENRKRKWWSDDDDTQGR----- 377
           WDSNAETFR                                 R    DDDD + +     
Sbjct: 62  WDSNAETFRTQRSRFNF-------------------------RDTADDDDDDESQEMDPG 96

Query: 378 NSVIEDVIDNVWFFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDKV 557
           ++++E+ ID+ W FKV RS+GW+LP I+IS+L+ TGPK FLMALALPLGQ+ +S A  K 
Sbjct: 97  SALLEEFIDSFWIFKVFRSYGWMLPLIIISVLLTTGPKAFLMALALPLGQSVLSLAFKKF 156

Query: 558 FXXXXXXXXXXXXXXXNPFSRAASSVEINEEELDESSGISEGRQGYQSWVTTDNGSVKQR 737
           +                PF+    +V +++EE ++S G  + + GYQSWV   NG    +
Sbjct: 157 WGMTQNSPKRRVRTKKKPFASTPGNVVMDDEEQEKSKGSRKRKMGYQSWV-AGNGVSVDK 215

Query: 738 GDQHKPSFGGWDELDMRKRVAKGFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLRL 917
             Q  P FGGWDELD R+ +  G  +R S +  G  +    KGK+S  GR  + PLLLRL
Sbjct: 216 DVQAAPKFGGWDELDGREELGAGSMQRRSARTAGSSQRTPVKGKLSWGGRKGDTPLLLRL 275

Query: 918 LVAVFPFLGSWTRLL 962
           L+AVFPFLGSWT++L
Sbjct: 276 LIAVFPFLGSWTKML 290


>ref|XP_002266422.1| PREDICTED: uncharacterized protein LOC100241669 [Vitis vinifera]
          Length = 287

 Score =  182 bits (461), Expect = 2e-43
 Identities = 113/255 (44%), Positives = 141/255 (55%), Gaps = 5/255 (1%)
 Frame = +3

Query: 213 WDSNAETFRXXXXXXXXXXXXXXXXXXXXXXXXXXTWRENRKRKWWSDDD---DTQGRNS 383
           WDSNAET R                            R+  +R WW DD    D  G   
Sbjct: 45  WDSNAETVRTQRFRFNDFVSDDDDDDDEDYEFDFG--RKEEQRTWWFDDSPGIDDDGEFE 102

Query: 384 VIEDVIDNVW-FFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDKVF 560
             E+ +D     FKV R+FGW+LPAI ISML+ TGP   +MALALPLGQ A+S AIDKV+
Sbjct: 103 FWEESVDGFGVVFKVFRAFGWMLPAIAISMLLGTGPNALIMALALPLGQTALSLAIDKVW 162

Query: 561 XXXXXXXXXXXXXXXNPFSRAASSVEINEEELDESSGISEGRQGYQSWVTTDNGSVKQRG 740
                           PFS+AA +  +NEE+  E+    +GR+ Y+SWV   +GSVK  G
Sbjct: 163 GRTSNRPKPRSQTKKKPFSQAARNTRMNEEKRGENKENCKGRETYKSWVGAPDGSVK--G 220

Query: 741 DQHKPSFGGWDELDMRKRVAKGFTKRHSQKV-GGPPRSGVDKGKMSRKGRHREAPLLLRL 917
            +  PSFGGWDELD      +G   +  ++V  GPPR    K K+SR  R+RE PLLLRL
Sbjct: 221 SKTAPSFGGWDELD-----KEGEANKTPRRVPDGPPRQ-QKKSKLSR--RNRETPLLLRL 272

Query: 918 LVAVFPFLGSWTRLL 962
           L+AVFPFLGSW +LL
Sbjct: 273 LIAVFPFLGSWAKLL 287


>gb|ACU20832.1| unknown [Glycine max]
          Length = 293

 Score =  176 bits (447), Expect = 8e-42
 Identities = 110/316 (34%), Positives = 159/316 (50%), Gaps = 10/316 (3%)
 Frame = +3

Query: 45  LSSPCPTAASLKPSSDKPFLLFFSLTRNPNSYSSNCCCYXXXXXXXXXXXXXXXXYWDSN 224
           LS P P    L PSS +P LL    + +  S SSN                     WDSN
Sbjct: 19  LSHPLP----LPPSSWRPLLLARPFSPSLVSCSSN-------------------KRWDSN 55

Query: 225 AETFRXXXXXXXXXXXXXXXXXXXXXXXXXXTWRENRKRKWWSDDDDT----------QG 374
           AETFR                               +KR+WWSD+D            + 
Sbjct: 56  AETFRPRNFTPNDVRKGQEQERELKEGF-------GKKRRWWSDEDREFEDKEEEVVEET 108

Query: 375 RNSVIEDVIDNVWFFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDK 554
            + ++ED ID+VWF ++ +S+GW LP I++S LI++GPK FLMAL LPLGQ+A++ A +K
Sbjct: 109 SSGILEDAIDSVWFLQIFKSYGWTLPVILMSWLISSGPKAFLMALILPLGQSALALAFEK 168

Query: 555 VFXXXXXXXXXXXXXXXNPFSRAASSVEINEEELDESSGISEGRQGYQSWVTTDNGSVKQ 734
           ++                P  R  + VE   EE  ++      ++GYQSWV  D GSV  
Sbjct: 169 LWGPSERKPKRKYRMRRKPRVRNYTRVEEEPEEKQKT------KKGYQSWVVEDKGSVDT 222

Query: 735 RGDQHKPSFGGWDELDMRKRVAKGFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLR 914
              +  PSFGGWD+L+  +      T + S+ + G  R+ ++ G++SR+ R  + PLLLR
Sbjct: 223 GSREAAPSFGGWDDLERSRP-----TTKSSRGMDGSRRTSMEGGRLSRRQRKSDTPLLLR 277

Query: 915 LLVAVFPFLGSWTRLL 962
           +L A+FPFLG+WT++L
Sbjct: 278 VLFAIFPFLGTWTKML 293


>ref|XP_003535982.1| PREDICTED: uncharacterized protein LOC100797034 [Glycine max]
          Length = 293

 Score =  176 bits (445), Expect = 1e-41
 Identities = 110/316 (34%), Positives = 158/316 (50%), Gaps = 10/316 (3%)
 Frame = +3

Query: 45  LSSPCPTAASLKPSSDKPFLLFFSLTRNPNSYSSNCCCYXXXXXXXXXXXXXXXXYWDSN 224
           LS P P    L PSS +P LL    + +  S SSN                     WDSN
Sbjct: 19  LSHPLP----LPPSSWRPLLLARPFSPSLVSCSSN-------------------KRWDSN 55

Query: 225 AETFRXXXXXXXXXXXXXXXXXXXXXXXXXXTWRENRKRKWWSDDDDT----------QG 374
           AETFR                               +KR+WWSD+D            + 
Sbjct: 56  AETFRPRNFTPNDVRKGQEQEQELKEGF-------GKKRRWWSDEDREFEDKEEEVVEET 108

Query: 375 RNSVIEDVIDNVWFFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDK 554
            + ++ED ID+VWF ++ +S+GW LP I++S LI++GPK FLMAL LPLGQ+A++ A +K
Sbjct: 109 SSGILEDAIDSVWFLQIFKSYGWTLPVILMSWLISSGPKAFLMALILPLGQSALALAFEK 168

Query: 555 VFXXXXXXXXXXXXXXXNPFSRAASSVEINEEELDESSGISEGRQGYQSWVTTDNGSVKQ 734
           ++                P  R  + VE   EE  ++      ++GYQSWV  D GSV  
Sbjct: 169 LWGPSERKPKRKYRMRRKPRVRNYTRVEEEPEEKQKT------KKGYQSWVVEDKGSVDT 222

Query: 735 RGDQHKPSFGGWDELDMRKRVAKGFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLR 914
              +  PSFGGWD+L+  +   K      S+ + G  R+ ++ G++SR+ R  + PLLLR
Sbjct: 223 GSREAAPSFGGWDDLERSRPATKS-----SRGMDGSRRTPMEGGRLSRRQRKSDTPLLLR 277

Query: 915 LLVAVFPFLGSWTRLL 962
           +L A+FPFLG+WT++L
Sbjct: 278 VLFAIFPFLGTWTKML 293


>ref|XP_002315598.1| predicted protein [Populus trichocarpa] gi|222864638|gb|EEF01769.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  171 bits (432), Expect = 4e-40
 Identities = 99/293 (33%), Positives = 145/293 (49%)
 Frame = +3

Query: 84  SSDKPFLLFFSLTRNPNSYSSNCCCYXXXXXXXXXXXXXXXXYWDSNAETFRXXXXXXXX 263
           +++KP+  F+S     + YS+   C                  WD NAET R        
Sbjct: 73  AAEKPYFFFYS-----HCYSTTTRCSSNNR-------------WDPNAETRRFNFKFKFR 114

Query: 264 XXXXXXXXXXXXXXXXXXTWRENRKRKWWSDDDDTQGRNSVIEDVIDNVWFFKVLRSFGW 443
                                + RKR+WWSD ++      ++E+ ID++W  ++ +S+GW
Sbjct: 115 DKNVDSVQVEEDEKGGSTRKGKKRKRRWWSDQEEEPP--GILEEAIDSLWVLQLAKSYGW 172

Query: 444 LLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDKVFXXXXXXXXXXXXXXXNPFSRA 623
           + P I+I+ L+ATGPK FLM LAL +GQ+A++FA  K+                      
Sbjct: 173 MFPPIVITSLLATGPKAFLMVLALSVGQSALTFAFQKLLGKTQSKPKRKVRKRRKTTGNT 232

Query: 624 ASSVEINEEELDESSGISEGRQGYQSWVTTDNGSVKQRGDQHKPSFGGWDELDMRKRVAK 803
            +  +I++EE D+  G  +GR GY+SWV  DNGS   + +Q  P+FGGWDE D       
Sbjct: 233 VNDADIDDEEQDK-EGAVKGRMGYRSWVVDDNGSF-NKDNQDAPNFGGWDEFDATA---- 286

Query: 804 GFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLRLLVAVFPFLGSWTRLL 962
                  Q+   P +  +  GK S  GR  + PLLLRLL+AVFPFLGSWT++L
Sbjct: 287 ------PQRKRQPRKKPLANGKWSMSGRKSDTPLLLRLLIAVFPFLGSWTKML 333


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