BLASTX nr result

ID: Coptis25_contig00028539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028539
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515609.1| conserved hypothetical protein [Ricinus comm...   459   e-127
ref|XP_002318504.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_004163299.1| PREDICTED: UNC93-like protein 1-like [Cucumi...   444   e-122
ref|XP_004137289.1| PREDICTED: UNC93-like protein 1-like [Cucumi...   444   e-122
ref|XP_004163297.1| PREDICTED: LOW QUALITY PROTEIN: UNC93-like p...   440   e-121

>ref|XP_002515609.1| conserved hypothetical protein [Ricinus communis]
            gi|223545247|gb|EEF46754.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 466

 Score =  459 bits (1180), Expect = e-127
 Identities = 230/311 (73%), Positives = 252/311 (81%)
 Frame = -2

Query: 1148 SIFWSIFNMGGVIGGLIPFAMNYHREKAVTVNDGTYIGFMCFMAFGAVLSLAILPPSRVI 969
            SIFWSIFNMGGVIGGLIPF +NYHR +A +VND TYIGFMCFMA G +LSLAILPPS+V+
Sbjct: 152  SIFWSIFNMGGVIGGLIPFFLNYHRSEAASVNDATYIGFMCFMAAGTLLSLAILPPSQVV 211

Query: 968  RDDGTKCSNIKYSNVHTEAVAILKLFLNWKMLLIVPAAWSSNFMYTYQFNHVNKGLFNLR 789
            RDDGT CSNIKYS V TEA  I+KLFLNWKMLLIVPAAW+SNF Y+YQFN+VN  LFNLR
Sbjct: 212  RDDGTHCSNIKYSKVSTEATEIVKLFLNWKMLLIVPAAWASNFFYSYQFNNVNGVLFNLR 271

Query: 788  TRGLNNVFYWGAQMLGSVLIGYILDFSFASRRMRXXXXXXXXXXXGTAIWGGGLANQLAY 609
            TRGLNNVFYWGAQMLGSV IG++LDFSF SR+MR           GTAIWGGGLANQL Y
Sbjct: 272  TRGLNNVFYWGAQMLGSVGIGWVLDFSFKSRKMRGFVGIGIVAVLGTAIWGGGLANQLRY 331

Query: 608  PHDLKVNTIDFIDSGSDFAGPFVLFFSYGLLDAMFQSLVYWVIGALADDSETLSRYAGFY 429
             H+     +DF DSGSDF GPFVL+FSYGLLDAMFQS VYWVIGALADDSE LSRY GFY
Sbjct: 332  SHNNLPPKLDFKDSGSDFGGPFVLYFSYGLLDAMFQSSVYWVIGALADDSEILSRYVGFY 391

Query: 428  KGVQSAGAAAAWQVDTQGASLMSQLVVNWSLTTVSYPLLVVLIMLAVKDAKNNEEGSAIK 249
            KGVQSAGAA AWQVDT    L+SQL+VNWSLTTVSYPLL+VL+MLAVKD    EE   + 
Sbjct: 392  KGVQSAGAAIAWQVDTHKVPLLSQLIVNWSLTTVSYPLLIVLVMLAVKDDHKIEE--RVS 449

Query: 248  SESPSAPPAVE 216
            +ES       E
Sbjct: 450  NESAKTDSVAE 460


>ref|XP_002318504.1| predicted protein [Populus trichocarpa] gi|222859177|gb|EEE96724.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  451 bits (1160), Expect = e-124
 Identities = 221/297 (74%), Positives = 245/297 (82%)
 Frame = -2

Query: 1148 SIFWSIFNMGGVIGGLIPFAMNYHREKAVTVNDGTYIGFMCFMAFGAVLSLAILPPSRVI 969
            S+FWSIFNMGGVIGGLIPF +NY+R +A +VNDGTYIGFMCFM  G +LSLAILPPS+V+
Sbjct: 153  SLFWSIFNMGGVIGGLIPFILNYNRSEAASVNDGTYIGFMCFMTAGTLLSLAILPPSKVV 212

Query: 968  RDDGTKCSNIKYSNVHTEAVAILKLFLNWKMLLIVPAAWSSNFMYTYQFNHVNKGLFNLR 789
            RDDGT+C+NIKYS V TEAV I KLF NWKMLLI PAAW+SNF Y+YQFN+VN  LFNLR
Sbjct: 213  RDDGTRCTNIKYSKVSTEAVEIGKLFFNWKMLLIAPAAWASNFFYSYQFNNVNGALFNLR 272

Query: 788  TRGLNNVFYWGAQMLGSVLIGYILDFSFASRRMRXXXXXXXXXXXGTAIWGGGLANQLAY 609
            TRGLNNVFYWGAQM+GSV IGYILDFSF SRR R           GTAIW GGLA Q+ Y
Sbjct: 273  TRGLNNVFYWGAQMVGSVGIGYILDFSFQSRRKRGFVGIGIVAALGTAIWAGGLAKQVGY 332

Query: 608  PHDLKVNTIDFIDSGSDFAGPFVLFFSYGLLDAMFQSLVYWVIGALADDSETLSRYAGFY 429
             H+     +DF DSGSDFAGPFVL+FSYGLLDAMFQS+VYWVIGALADDSE LSRY GFY
Sbjct: 333  KHNDLPPKLDFKDSGSDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSEILSRYVGFY 392

Query: 428  KGVQSAGAAAAWQVDTQGASLMSQLVVNWSLTTVSYPLLVVLIMLAVKDAKNNEEGS 258
            KGVQSAGAA AWQVD     L+SQL+VNWSLTTVSYPLL +L+MLAVKD +  EE S
Sbjct: 393  KGVQSAGAAVAWQVDAHKVPLLSQLIVNWSLTTVSYPLLAILVMLAVKDDQKGEEPS 449


>ref|XP_004163299.1| PREDICTED: UNC93-like protein 1-like [Cucumis sativus]
          Length = 463

 Score =  444 bits (1141), Expect = e-122
 Identities = 215/295 (72%), Positives = 244/295 (82%)
 Frame = -2

Query: 1148 SIFWSIFNMGGVIGGLIPFAMNYHREKAVTVNDGTYIGFMCFMAFGAVLSLAILPPSRVI 969
            SIFWSIFNMGGV+GGLIPF +NYHR  A +VNDGTYIGFMCFM+ GAV SLAILPPSRV+
Sbjct: 153  SIFWSIFNMGGVVGGLIPFVLNYHRTTASSVNDGTYIGFMCFMSIGAVTSLAILPPSRVV 212

Query: 968  RDDGTKCSNIKYSNVHTEAVAILKLFLNWKMLLIVPAAWSSNFMYTYQFNHVNKGLFNLR 789
            RDDG++C+NIKYS+V  E V ILKLFLNWKMLLIVPAAWSSNF YTYQFN+VN  LFNLR
Sbjct: 213  RDDGSRCTNIKYSSVSVEFVEILKLFLNWKMLLIVPAAWSSNFFYTYQFNNVNGALFNLR 272

Query: 788  TRGLNNVFYWGAQMLGSVLIGYILDFSFASRRMRXXXXXXXXXXXGTAIWGGGLANQLAY 609
            TRG NNVFYWGAQMLGS+ IGYI+DFSF SR+ R           GT IW GGLANQL Y
Sbjct: 273  TRGFNNVFYWGAQMLGSIGIGYIMDFSFKSRKTRGLFGVSLVALLGTGIWAGGLANQLRY 332

Query: 608  PHDLKVNTIDFIDSGSDFAGPFVLFFSYGLLDAMFQSLVYWVIGALADDSETLSRYAGFY 429
              +  ++ +DF +SGS+F GPF L+F +GLLDAMFQS+VYWVIGALADDSETLSRY+GFY
Sbjct: 333  SRNKVLDKLDFKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFY 392

Query: 428  KGVQSAGAAAAWQVDTQGASLMSQLVVNWSLTTVSYPLLVVLIMLAVKDAKNNEE 264
            KGVQSAGAA AWQVD    S M QLVVNWSLTT+SYPLL+VL+ LAV D  ++E+
Sbjct: 393  KGVQSAGAAVAWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEK 447


>ref|XP_004137289.1| PREDICTED: UNC93-like protein 1-like [Cucumis sativus]
          Length = 561

 Score =  444 bits (1141), Expect = e-122
 Identities = 215/295 (72%), Positives = 244/295 (82%)
 Frame = -2

Query: 1148 SIFWSIFNMGGVIGGLIPFAMNYHREKAVTVNDGTYIGFMCFMAFGAVLSLAILPPSRVI 969
            SIFWSIFNMGGV+GGLIPF +NYHR  A +VNDGTYIGFMCFM+ GAV SLAILPPSRV+
Sbjct: 153  SIFWSIFNMGGVVGGLIPFVLNYHRTTASSVNDGTYIGFMCFMSIGAVTSLAILPPSRVV 212

Query: 968  RDDGTKCSNIKYSNVHTEAVAILKLFLNWKMLLIVPAAWSSNFMYTYQFNHVNKGLFNLR 789
            RDDG++C+NIKYS+V  E V ILKLFLNWKMLLIVPAAWSSNF YTYQFN+VN  LFNLR
Sbjct: 213  RDDGSRCTNIKYSSVSVEFVEILKLFLNWKMLLIVPAAWSSNFFYTYQFNNVNGALFNLR 272

Query: 788  TRGLNNVFYWGAQMLGSVLIGYILDFSFASRRMRXXXXXXXXXXXGTAIWGGGLANQLAY 609
            TRG NNVFYWGAQMLGS+ IGYI+DFSF SR+ R           GT IW GGLANQL Y
Sbjct: 273  TRGFNNVFYWGAQMLGSIGIGYIMDFSFKSRKTRGLFGVSLVALLGTGIWAGGLANQLRY 332

Query: 608  PHDLKVNTIDFIDSGSDFAGPFVLFFSYGLLDAMFQSLVYWVIGALADDSETLSRYAGFY 429
              +  ++ +DF +SGS+F GPF L+F +GLLDAMFQS+VYWVIGALADDSETLSRY+GFY
Sbjct: 333  SRNKVLDKLDFKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFY 392

Query: 428  KGVQSAGAAAAWQVDTQGASLMSQLVVNWSLTTVSYPLLVVLIMLAVKDAKNNEE 264
            KGVQSAGAA AWQVD    S M QLVVNWSLTT+SYPLL+VL+ LAV D  ++E+
Sbjct: 393  KGVQSAGAAVAWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEK 447


>ref|XP_004163297.1| PREDICTED: LOW QUALITY PROTEIN: UNC93-like protein 1-like [Cucumis
            sativus]
          Length = 458

 Score =  440 bits (1132), Expect = e-121
 Identities = 216/303 (71%), Positives = 245/303 (80%)
 Frame = -2

Query: 1148 SIFWSIFNMGGVIGGLIPFAMNYHREKAVTVNDGTYIGFMCFMAFGAVLSLAILPPSRVI 969
            SIFWSIFNMGGV+GGLIPF +NYHR  A +VNDGTYIGFMCFM+ GA++SLAILPPSRV+
Sbjct: 153  SIFWSIFNMGGVVGGLIPFILNYHRTTASSVNDGTYIGFMCFMSIGALISLAILPPSRVV 212

Query: 968  RDDGTKCSNIKYSNVHTEAVAILKLFLNWKMLLIVPAAWSSNFMYTYQFNHVNKGLFNLR 789
            RDDG++C+NI YS+V  E V ILKLFLNWKMLLIVPAAWSSNF YTYQFN+VN  LFNLR
Sbjct: 213  RDDGSRCTNITYSSVSVEFVEILKLFLNWKMLLIVPAAWSSNFFYTYQFNNVNGVLFNLR 272

Query: 788  TRGLNNVFYWGAQMLGSVLIGYILDFSFASRRMRXXXXXXXXXXXGTAIWGGGLANQLAY 609
            TRG NNVFYWGAQM+GSV IGYILDFSF SRR R           GT IW GGLANQL Y
Sbjct: 273  TRGFNNVFYWGAQMVGSVGIGYILDFSFKSRRTRGLFGISLVALLGTGIWAGGLANQLRY 332

Query: 608  PHDLKVNTIDFIDSGSDFAGPFVLFFSYGLLDAMFQSLVYWVIGALADDSETLSRYAGFY 429
                 ++ +DF DSGSDF GPF L+F +GLLDAMFQS+VYWVIGALADDSETLSRY+GFY
Sbjct: 333  SRHNVLDKLDFKDSGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFY 392

Query: 428  KGVQSAGAAAAWQVDTQGASLMSQLVVNWSLTTVSYPLLVVLIMLAVKDAKNNEEGSAIK 249
            KGVQSAGAA AWQ+DT   S MSQLVVNWSLT++SYPLL  L+  AVK+ K   + +  +
Sbjct: 393  KGVQSAGAAVAWQIDTHHVSFMSQLVVNWSLTSLSYPLLGFLVFFAVKEDKKPTDETCKE 452

Query: 248  SES 240
            + S
Sbjct: 453  ANS 455


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