BLASTX nr result

ID: Coptis25_contig00028534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028534
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82619.1| hypothetical protein VITISV_000120 [Vitis vinifera]   149   8e-34
ref|XP_002274565.1| PREDICTED: uncharacterized protein LOC100263...   148   1e-33
ref|XP_002516894.1| conserved hypothetical protein [Ricinus comm...   144   1e-32
ref|NP_001031899.1| uncharacterized protein [Arabidopsis thalian...   141   1e-31
ref|XP_002871821.1| hypothetical protein ARALYDRAFT_488737 [Arab...   141   1e-31

>emb|CAN82619.1| hypothetical protein VITISV_000120 [Vitis vinifera]
          Length = 160

 Score =  149 bits (375), Expect = 8e-34
 Identities = 81/115 (70%), Positives = 93/115 (80%), Gaps = 6/115 (5%)
 Frame = +1

Query: 277 EEPGLTEEERKAMRGSKFAPL---SSRPPTT---RLAHPGGPLTTNKAAALAKFLERKLQ 438
           E  GLTEE+R+A+RGSKFAPL   S+RPP++   RLAHPGGPLTTNKAAALAKFLERKL 
Sbjct: 4   ELEGLTEEDRRALRGSKFAPLPSSSARPPSSSQPRLAHPGGPLTTNKAAALAKFLERKLH 63

Query: 439 EPDGLASLNPALLERAVQNAKETVLASGSSTSGRVIRHVASFGDPELPDSGEEDE 603
           EP GLAS+NP LLE AV+NAK+TV ASG+S SGR+IRHV SFG+ E     EE E
Sbjct: 64  EPGGLASINPDLLELAVKNAKDTVNASGTSKSGRIIRHVTSFGETENSHKEEEVE 118


>ref|XP_002274565.1| PREDICTED: uncharacterized protein LOC100263086 [Vitis vinifera]
           gi|297736886|emb|CBI26087.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  148 bits (374), Expect = 1e-33
 Identities = 82/115 (71%), Positives = 92/115 (80%), Gaps = 6/115 (5%)
 Frame = +1

Query: 277 EEPGLTEEERKAMRGSKFAPL---SSRPPTT---RLAHPGGPLTTNKAAALAKFLERKLQ 438
           E  GLTEE+R+A+RGSKFAPL   S+RPP++   RLAHPGGPLTTNKAAALAKFLERKL 
Sbjct: 4   ELEGLTEEDRRALRGSKFAPLPSSSARPPSSSQPRLAHPGGPLTTNKAAALAKFLERKLH 63

Query: 439 EPDGLASLNPALLERAVQNAKETVLASGSSTSGRVIRHVASFGDPELPDSGEEDE 603
           EP GLASLNP LLE AV+NAK+TV ASG+S SGR IRHV SFG+ E     EE E
Sbjct: 64  EPGGLASLNPDLLELAVKNAKDTVNASGTSKSGRTIRHVTSFGETENSHKEEEVE 118


>ref|XP_002516894.1| conserved hypothetical protein [Ricinus communis]
           gi|223543982|gb|EEF45508.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  144 bits (364), Expect = 1e-32
 Identities = 77/115 (66%), Positives = 92/115 (80%), Gaps = 4/115 (3%)
 Frame = +1

Query: 286 GLTEEERKAMRGSKFAPL----SSRPPTTRLAHPGGPLTTNKAAALAKFLERKLQEPDGL 453
           GL+EEERKA+RGSKFAPL    SSR    +LAHPGGPL TNKAAALAKFLERKLQ+P+GL
Sbjct: 3   GLSEEERKALRGSKFAPLPPPSSSRSRQPKLAHPGGPLKTNKAAALAKFLERKLQDPNGL 62

Query: 454 ASLNPALLERAVQNAKETVLASGSSTSGRVIRHVASFGDPELPDSGEEDEGKIQN 618
           +S++P L+E AVQNAK +V +SG+S SG +I HV SFGD E  DS E  EGK++N
Sbjct: 63  SSIDPDLVELAVQNAKHSVSSSGTSKSGTIIHHVTSFGDSEPEDSAE--EGKVEN 115


>ref|NP_001031899.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332005194|gb|AED92577.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 166

 Score =  141 bits (356), Expect = 1e-31
 Identities = 74/115 (64%), Positives = 96/115 (83%), Gaps = 5/115 (4%)
 Frame = +1

Query: 289 LTEEERKAMRGSKFAPLSSRPPTTR-----LAHPGGPLTTNKAAALAKFLERKLQEPDGL 453
           LTE+E++A+RGSKFAPL+S P ++R     LAHPGGPL TNKAAALAKFLERKLQ+P+GL
Sbjct: 10  LTEDEKRALRGSKFAPLTSLPSSSRSKPPRLAHPGGPLKTNKAAALAKFLERKLQDPNGL 69

Query: 454 ASLNPALLERAVQNAKETVLASGSSTSGRVIRHVASFGDPELPDSGEEDEGKIQN 618
           AS++PAL+E AV+NAK+TV++SG+S+SGR I+HVASF D E+      D+ KI+N
Sbjct: 70  ASIDPALVELAVKNAKDTVISSGASSSGRRIQHVASFEDVEV----SSDDDKIEN 120


>ref|XP_002871821.1| hypothetical protein ARALYDRAFT_488737 [Arabidopsis lyrata subsp.
           lyrata] gi|297317658|gb|EFH48080.1| hypothetical protein
           ARALYDRAFT_488737 [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score =  141 bits (356), Expect = 1e-31
 Identities = 74/115 (64%), Positives = 96/115 (83%), Gaps = 5/115 (4%)
 Frame = +1

Query: 289 LTEEERKAMRGSKFAPLSSRPPTTR-----LAHPGGPLTTNKAAALAKFLERKLQEPDGL 453
           LTE+E++A+RGSKFAPL+S P ++R     LAHPGGPL TNKAAALAKFLERKLQ+P+GL
Sbjct: 10  LTEDEKRALRGSKFAPLTSLPSSSRSKPPRLAHPGGPLKTNKAAALAKFLERKLQDPNGL 69

Query: 454 ASLNPALLERAVQNAKETVLASGSSTSGRVIRHVASFGDPELPDSGEEDEGKIQN 618
           AS++PAL+E AV+NAK+TV++SG+S+SGR I+HVASF D E+      D+ KI+N
Sbjct: 70  ASIDPALVELAVKNAKDTVISSGASSSGRRIQHVASFEDVEV----SSDDDKIEN 120


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