BLASTX nr result

ID: Coptis25_contig00028532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028532
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254...    69   5e-10
emb|CBI39482.3| unnamed protein product [Vitis vinifera]               69   5e-10
emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]    69   5e-10
ref|XP_002520652.1| hypothetical protein RCOM_0555240 [Ricinus c...    55   5e-06
emb|CBI32239.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254594 [Vitis vinifera]
          Length = 954

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -2

Query: 212 MDPVVFDHDEEFIIEDTSHDHVFPEGCPDLYDIFGDPHILPRVGDQYQVEIPPVMTEWER 33
           MD    DHD++ I E TS   + P+  PD+ DIFG+P + PRVG +YQVEIP ++TE ER
Sbjct: 92  MDSAHQDHDDKCIEETTSDQLLHPDS-PDINDIFGEPLVHPRVGYEYQVEIPLMITESER 150

Query: 32  LQLMKNPAD 6
            +L+ NPAD
Sbjct: 151 DKLLVNPAD 159


>emb|CBI39482.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -2

Query: 212 MDPVVFDHDEEFIIEDTSHDHVFPEGCPDLYDIFGDPHILPRVGDQYQVEIPPVMTEWER 33
           MD    DHD++ I E TS   + P+  PD+ DIFG+P + PRVG +YQVEIP ++TE ER
Sbjct: 1   MDSAHQDHDDKCIEETTSDQLLHPDS-PDINDIFGEPLVHPRVGYEYQVEIPLMITESER 59

Query: 32  LQLMKNPAD 6
            +L+ NPAD
Sbjct: 60  DKLLVNPAD 68


>emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]
          Length = 958

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -2

Query: 212 MDPVVFDHDEEFIIEDTSHDHVFPEGCPDLYDIFGDPHILPRVGDQYQVEIPPVMTEWER 33
           MD    DHD++ I E TS   + P+  PD+ DIFG+P + PRVG +YQVEIP ++TE ER
Sbjct: 39  MDSAHQDHDDKCIEETTSDQLLHPDS-PDINDIFGEPLVHPRVGYEYQVEIPLMITESER 97

Query: 32  LQLMKNPAD 6
            +L+ NPAD
Sbjct: 98  DKLLVNPAD 106


>ref|XP_002520652.1| hypothetical protein RCOM_0555240 [Ricinus communis]
           gi|223540037|gb|EEF41614.1| hypothetical protein
           RCOM_0555240 [Ricinus communis]
          Length = 280

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
 Frame = -2

Query: 173 IEDTSHDHVFPEGCP---DLYDIFGDPHILPRVGDQYQVEIPPVMTEWERLQLMKNP 12
           +E+T  + V     P   ++ D FGDP +LPRVGDQYQ EIPP++++ +RLQL+  P
Sbjct: 1   MEETQDESVQQSLSPCSSEMGDSFGDPEVLPRVGDQYQPEIPPLISDQDRLQLINLP 57


>emb|CBI32239.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = -2

Query: 173 IEDTSHDHVFPEGCPDLYDIFGDPHILPRVGDQYQVEIPPVMTEWERLQLMKNPADT 3
           +E+ S  H  P    D+ D FGDP + PRVG++YQ +IPP++ E+  LQL    A+T
Sbjct: 4   VENESAKHFPPPCSSDIGDSFGDPQVHPRVGEEYQAKIPPLIEEYTHLQLTLKSAET 60


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