BLASTX nr result

ID: Coptis25_contig00028530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028530
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308301.1| NAC domain protein, IPR003441 [Populus trich...    66   3e-09
ref|XP_003532468.1| PREDICTED: uncharacterized protein LOC100799...    59   4e-07
ref|XP_003517632.1| PREDICTED: uncharacterized protein LOC100795...    58   7e-07
ref|XP_003524411.1| PREDICTED: uncharacterized protein LOC100794...    58   9e-07

>ref|XP_002308301.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222854277|gb|EEE91824.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 455

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
 Frame = +1

Query: 76  MDIQQLKSDHFSFVPFRKSFDEVRVEETTKGRDASPH-TC------XXXXXXXXXXXXXX 234
           +DI QLKSDHF F PFRKSFDEV + E +  R+AS   TC                    
Sbjct: 269 LDIHQLKSDHFGFTPFRKSFDEVGIREASVAREASASGTCDEIQEQHQRPHHVAHDPHQQ 328

Query: 235 XXXXXXXXXXXXXXXVTTAAYHVXXXXXXXXXXXXXXXLHHTSVVPYEDSFHMSRIIL 408
                          + TAA+H+               LHHTS++  ED +H+SR++L
Sbjct: 329 QQLQHHHHHQTVHHQIATAAFHISRPSHPISTIISPSPLHHTSIILDEDPYHVSRLML 386


>ref|XP_003532468.1| PREDICTED: uncharacterized protein LOC100799291 [Glycine max]
          Length = 450

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/111 (30%), Positives = 47/111 (42%)
 Frame = +1

Query: 76  MDIQQLKSDHFSFVPFRKSFDEVRVEETTKGRDASPHTCXXXXXXXXXXXXXXXXXXXXX 255
           +DIQQLKSDHF F+PFRK FDEV + E    R+                           
Sbjct: 279 LDIQQLKSDHFGFIPFRKGFDEVGIGEACTAREVQ---ASGSCDEVHERHAVHHHQQQQQ 335

Query: 256 XXXXXXXXVTTAAYHVXXXXXXXXXXXXXXXLHHTSVVPYEDSFHMSRIIL 408
                   + T A H+               LHH S++  ++S+H+SRI+L
Sbjct: 336 QNQHAQQQIATTASHISRPSLPISTIISPPPLHHASIILDDNSYHVSRIML 386


>ref|XP_003517632.1| PREDICTED: uncharacterized protein LOC100795246 [Glycine max]
          Length = 451

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = +1

Query: 76  MDIQQLKSDHFSFVPFRKSFDE---VRVEETTKGRDASPHTCXXXXXXXXXXXXXXXXXX 246
           +DIQQLK DHFSF+PFRKSFDE   V + E +  R+                        
Sbjct: 273 LDIQQLKPDHFSFIPFRKSFDERMQVGIGEASTAREVM-QASGSCEEVHERHLAQVTPHH 331

Query: 247 XXXXXXXXXXXVTTAAYHVXXXXXXXXXXXXXXXLHHTSVVPYEDSFHMSRIIL 408
                      ++ +A+H+               LHHTS++  ++S+H+SRI+L
Sbjct: 332 HQLQQHAHHHQISNSAFHISRPSHPISTIISPPPLHHTSIILDDNSYHVSRIML 385


>ref|XP_003524411.1| PREDICTED: uncharacterized protein LOC100794811 [Glycine max]
          Length = 445

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/111 (28%), Positives = 48/111 (43%)
 Frame = +1

Query: 76  MDIQQLKSDHFSFVPFRKSFDEVRVEETTKGRDASPHTCXXXXXXXXXXXXXXXXXXXXX 255
           +DIQQLKS+HF F+PFRK FDEV + E +  R+                           
Sbjct: 275 LDIQQLKSNHFGFIPFRKGFDEVGIGEASTAREVQ----ASGSCNEVHERHVAHHHQQQQ 330

Query: 256 XXXXXXXXVTTAAYHVXXXXXXXXXXXXXXXLHHTSVVPYEDSFHMSRIIL 408
                   + T A+H+                HH S++  ++S+H+SRI+L
Sbjct: 331 QNQHAHQQIATTAFHISSPSLPISTIISPPPFHHASIILDDNSYHVSRIML 381


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