BLASTX nr result

ID: Coptis25_contig00028529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028529
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148619.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   148   4e-34
ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]     148   5e-34
tpg|DAA53537.1| TPA: hypothetical protein ZEAMMB73_477539 [Zea m...   145   3e-33
ref|NP_001169416.1| hypothetical protein [Zea mays] gi|224029221...   145   3e-33
emb|CBI30394.3| unnamed protein product [Vitis vinifera]              145   4e-33

>ref|XP_004148619.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
           gi|449518467|ref|XP_004166263.1| PREDICTED: UPF0420
           protein C16orf58 homolog [Cucumis sativus]
          Length = 495

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/122 (63%), Positives = 88/122 (72%)
 Frame = -3

Query: 366 FIGSVGSIFDLSTXXXXXXXXXXXXLGNLAKAVARGLKDPSFRVIQSHFAISENLGDXXX 187
           FIGS GSIFDL+T            LGNL KAVARGLKDPSFRVIQ+HFA+S NLG+   
Sbjct: 214 FIGSAGSIFDLATPLYPSYFLPLASLGNLTKAVARGLKDPSFRVIQNHFAVSGNLGEIAA 273

Query: 186 XXXXXXXXAQLFGLALGILVLDAPGIQSSYMTLALTWMSMRLLHLWLRYQSLSALKFNTI 7
                   AQL GLA+GIL+LD PG+ +SY  L+ TW+SMRLLHLWLRYQSL+ L FNTI
Sbjct: 274 KEEVWEVVAQLLGLAIGILILDTPGLVNSYSVLSATWLSMRLLHLWLRYQSLAVLHFNTI 333

Query: 6   NL 1
           NL
Sbjct: 334 NL 335


>ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]
          Length = 480

 Score =  148 bits (373), Expect = 5e-34
 Identities = 77/122 (63%), Positives = 89/122 (72%)
 Frame = -3

Query: 366 FIGSVGSIFDLSTXXXXXXXXXXXXLGNLAKAVARGLKDPSFRVIQSHFAISENLGDXXX 187
           FIGS GSIFDL+T            LGNL KAVARGLKDPSFRVIQ+HFAIS NLG+   
Sbjct: 194 FIGSAGSIFDLTTQLYPAYFLPLASLGNLTKAVARGLKDPSFRVIQNHFAISGNLGEVAA 253

Query: 186 XXXXXXXXAQLFGLALGILVLDAPGIQSSYMTLALTWMSMRLLHLWLRYQSLSALKFNTI 7
                   AQL GL+LGIL+LD PG+  SY  ++LTW+SMRLLHLWLRY+SLS L+FNTI
Sbjct: 254 KEEVWEVVAQLVGLSLGILILDTPGLVKSYGVISLTWLSMRLLHLWLRYESLSVLQFNTI 313

Query: 6   NL 1
           N+
Sbjct: 314 NI 315


>tpg|DAA53537.1| TPA: hypothetical protein ZEAMMB73_477539 [Zea mays]
          Length = 295

 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = -3

Query: 366 FIGSVGSIFDLSTXXXXXXXXXXXXLGNLAKAVARGLKDPSFRVIQSHFAISENLGDXXX 187
           FIGS GSIF+LST            LGNLAKA+ARG KDPSFRVIQ+HFA S NLG+   
Sbjct: 5   FIGSAGSIFELSTTLYPGYFLPLASLGNLAKAIARGFKDPSFRVIQNHFAESGNLGEVAA 64

Query: 186 XXXXXXXXAQLFGLALGILVLDAPGIQSSYMTLALTWMSMRLLHLWLRYQSLSALKFNTI 7
                   AQL GL++G+L++D  G++SSY+TL LTW+S+RLLHLWLRYQS+S LKF TI
Sbjct: 65  KEEVWEVGAQLLGLSIGVLIMDKTGVKSSYLTLVLTWLSVRLLHLWLRYQSISVLKFRTI 124

Query: 6   NL 1
           NL
Sbjct: 125 NL 126


>ref|NP_001169416.1| hypothetical protein [Zea mays] gi|224029221|gb|ACN33686.1| unknown
           [Zea mays] gi|414876408|tpg|DAA53539.1| TPA:
           hypothetical protein ZEAMMB73_477539 [Zea mays]
          Length = 481

 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/122 (60%), Positives = 89/122 (72%)
 Frame = -3

Query: 366 FIGSVGSIFDLSTXXXXXXXXXXXXLGNLAKAVARGLKDPSFRVIQSHFAISENLGDXXX 187
           FIGS GSIF+LST            LGNLAKA+ARG KDPSFRVIQ+HFA S NLG+   
Sbjct: 191 FIGSAGSIFELSTTLYPGYFLPLASLGNLAKAIARGFKDPSFRVIQNHFAESGNLGEVAA 250

Query: 186 XXXXXXXXAQLFGLALGILVLDAPGIQSSYMTLALTWMSMRLLHLWLRYQSLSALKFNTI 7
                   AQL GL++G+L++D  G++SSY+TL LTW+S+RLLHLWLRYQS+S LKF TI
Sbjct: 251 KEEVWEVGAQLLGLSIGVLIMDKTGVKSSYLTLVLTWLSVRLLHLWLRYQSISVLKFRTI 310

Query: 6   NL 1
           NL
Sbjct: 311 NL 312


>emb|CBI30394.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  145 bits (365), Expect = 4e-33
 Identities = 79/121 (65%), Positives = 87/121 (71%)
 Frame = -3

Query: 363 IGSVGSIFDLSTXXXXXXXXXXXXLGNLAKAVARGLKDPSFRVIQSHFAISENLGDXXXX 184
           IGS GSIFDLST            LGNLAKAVARGLKDPSFRVIQ+HFAIS NLG+    
Sbjct: 178 IGSAGSIFDLSTQLYPAYFLQLASLGNLAKAVARGLKDPSFRVIQNHFAISGNLGEVAAK 237

Query: 183 XXXXXXXAQLFGLALGILVLDAPGIQSSYMTLALTWMSMRLLHLWLRYQSLSALKFNTIN 4
                  AQL GLALGI+VL +P + +SY  LA TWMSMRLLHLWLRYQSLS L+F +IN
Sbjct: 238 EEVWEVAAQLLGLALGIMVLTSPLVATSYPVLAFTWMSMRLLHLWLRYQSLSVLRFKSIN 297

Query: 3   L 1
           L
Sbjct: 298 L 298


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