BLASTX nr result

ID: Coptis25_contig00028526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028526
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   7e-08
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   1e-06
ref|XP_003614970.1| hypothetical protein MTR_5g061900 [Medicago ...    59   2e-06
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   5e-06

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
 Frame = +3

Query: 66   NRIWSANLSGSWQLFLWKLYVGFLPIGDVLASKHLFGDFACPFCFKHVETSYHLFFGCDW 245
            N +WS N+S   + FLW+     LP+  VL  +HL  +  CP C +  ET +HLF+ C  
Sbjct: 1040 NILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPM 1099

Query: 246  IRGIW--FRSIISLRMDAYNWNTRNWLDEIMEWSISKDEQVAKLAIFACILLQGIWFMRN 419
               +W    S I L             D ++ WS    +  AK+    C +L  +W  RN
Sbjct: 1100 SLKLWEELGSYILLP----GIEDEAMCDTLVRWS----QMDAKVVQKGCYILWNVWVERN 1151

Query: 420  SCKFD 434
               F+
Sbjct: 1152 RRVFE 1156


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 43/154 (27%), Positives = 70/154 (45%)
 Frame = +3

Query: 33   GQNSTYQQVFVNRIWSANLSGSWQLFLWKLYVGFLPIGDVLASKHLFGDFACPFCFKHVE 212
            G    + Q +V+ IWS ++S   + FLW+L    LP+  +L  +HL  D  CP+    +E
Sbjct: 1027 GNLDNFHQAWVD-IWSLDVSPKVRHFLWRLCTTSLPVRSLLKHRHLTDDDLCPWGCGEIE 1085

Query: 213  TSYHLFFGCDWIRGIWFRSIISLRMDAYNWNTRNWLDEIMEWSISKDEQVAKLAIFACIL 392
            T  H  F C  +R +W  S         N  +R+    + +  +S      KL I    L
Sbjct: 1086 TQRHAIFDCPKMRDLWLDS------GCQNLCSRDASMSMCDLLVSWRSLDGKLRIKGAYL 1139

Query: 393  LQGIWFMRNSCKFDAGRPNSEKLLRSSNKLWEKS 494
               IW  RN+  F+     S  L++  ++L E++
Sbjct: 1140 AWCIWGERNAKIFNNKTTPSSVLMQRVSRLVEEN 1173


>ref|XP_003614970.1| hypothetical protein MTR_5g061900 [Medicago truncatula]
           gi|355516305|gb|AES97928.1| hypothetical protein
           MTR_5g061900 [Medicago truncatula]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
 Frame = +3

Query: 69  RIWSANLSGSWQLFLWKLYVGFLPIGDVLASKHLFGDFACPFCFKHVETSYHLFFGCDWI 248
           RIW  N     +  LW++Y G +P    L S+H+  +  CP+C   +E  +H F GC   
Sbjct: 34  RIWKVNSPHKARNLLWRIYRGCVPTHFRLQSRHVQCEVVCPWCDTTIEDDWHAFVGCTMA 93

Query: 249 RGIWFRSIISLRMDAYNWNTRNWLDEIMEWSISKDEQVA-KLAIFACI 389
           RG W+ + +S  +        +  D + +   S+    A ++A+  CI
Sbjct: 94  RGSWYWARLSTVVQPRVGTVNSLADFVFDICCSESRDFAGRMALLLCI 141


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
 Frame = +3

Query: 33   GQNSTYQQVFVNRIWSANLSGSWQLFLWKLYVGFLPIGDVLASKHLFGDFACPFCFKHVE 212
            G   ++ Q +++ IWS  +S   + FLW+L    LP+  +L  +H+  D  CP      E
Sbjct: 1027 GNLDSFHQAWID-IWSMEVSPKVKHFLWRLGTNTLPVRSLLKHRHMLDDDLCPRGCGEPE 1085

Query: 213  TSYHLFFGCDWIRGIWFRSIISLRMDAYN-WNTRNWLDEIMEWSISKDEQVAKLAIFACI 389
            + +H  FGC +IR +W    +    D +    T   + E +  S   D  V     F   
Sbjct: 1086 SQFHAIFGCPFIRDLW----VDSGCDNFRALTTDTAMTEALVNSHGLDASVRTKGAFMAW 1141

Query: 390  LLQGIWFMRNSCKFDAGRPNSEKLLRSSNKLWEK 491
            +L   W  RNS  F+        LL   ++L E+
Sbjct: 1142 VL---WSERNSIVFNQSSTPPHILLARVSRLVEE 1172


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