BLASTX nr result

ID: Coptis25_contig00028524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028524
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530233.1| PREDICTED: uncharacterized protein LOC100781...   101   6e-20
ref|XP_003531743.1| PREDICTED: uncharacterized protein LOC100527...   100   2e-19
ref|XP_004135879.1| PREDICTED: uncharacterized protein LOC101214...    99   5e-19
ref|XP_004163510.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    96   2e-18
ref|XP_002889269.1| predicted protein [Arabidopsis lyrata subsp....    95   5e-18

>ref|XP_003530233.1| PREDICTED: uncharacterized protein LOC100781956 [Glycine max]
          Length = 81

 Score =  101 bits (252), Expect = 6e-20
 Identities = 43/60 (71%), Positives = 53/60 (88%)
 Frame = +3

Query: 6   SKSNGSVGGGFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLEK 185
           +K+N +VGGG RS++ HYLYSGDKKHVFVG+ +I A+F +PW LMNRG+KHQSHQDYLEK
Sbjct: 5   TKANSNVGGGSRSRLNHYLYSGDKKHVFVGLTLITAVFTIPWFLMNRGTKHQSHQDYLEK 64


>ref|XP_003531743.1| PREDICTED: uncharacterized protein LOC100527649 [Glycine max]
           gi|255632854|gb|ACU16780.1| unknown [Glycine max]
          Length = 77

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/58 (72%), Positives = 51/58 (87%)
 Frame = +3

Query: 12  SNGSVGGGFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLEK 185
           SN +VGGGFRS++ HYLYSGDKKHVFVG+ +I A+F +PW  M+RG+KHQSHQDYLEK
Sbjct: 3   SNSNVGGGFRSRLNHYLYSGDKKHVFVGLTLITAVFTIPWYFMSRGTKHQSHQDYLEK 60


>ref|XP_004135879.1| PREDICTED: uncharacterized protein LOC101214375 [Cucumis sativus]
          Length = 83

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/62 (70%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
 Frame = +3

Query: 6   SKSNGSVGG--GFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYL 179
           +KS G+ GG  GFRS+MEHYLYSGDKKHV  GIVI G +F +PW LMNRGSKH+SHQDY+
Sbjct: 5   AKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHRSHQDYM 64

Query: 180 EK 185
           E+
Sbjct: 65  ER 66


>ref|XP_004163510.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231692 [Cucumis sativus]
          Length = 94

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 2/62 (3%)
 Frame = +3

Query: 6   SKSNGSVGG--GFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYL 179
           +KS G+ GG  GFRS+MEHYLYSGD KHV  GIVI G +F +PW LMNRGSKH+SHQDY+
Sbjct: 5   AKSGGASGGAGGFRSRMEHYLYSGDXKHVAAGIVIFGIIFGIPWALMNRGSKHRSHQDYM 64

Query: 180 EK 185
           E+
Sbjct: 65  ER 66


>ref|XP_002889269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335110|gb|EFH65528.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 79

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/60 (66%), Positives = 51/60 (85%)
 Frame = +3

Query: 6   SKSNGSVGGGFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLEK 185
           ++S  ++GGGFR+KMEHY+YSG+KKHV  GI II  +F +PW LMN+GSKH+SHQDYLEK
Sbjct: 3   NESKSNLGGGFRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRSHQDYLEK 62


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