BLASTX nr result

ID: Coptis25_contig00028515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028515
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|NP_001237748.1| nodulin [Glycine max] gi|3851530|gb|AAC72337...   122   2e-26
ref|XP_003590560.1| Flotillin-like protein [Medicago truncatula]...   122   2e-26
ref|XP_003603337.1| Flotillin-like protein [Medicago truncatula]...   122   3e-26

>ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|222866322|gb|EEF03453.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -3

Query: 414 YLAMRDYLMIDNGMFQEIAKVNAGAVAGLKPNISVWTNGEQLSDGSGEGGCNSAMKEIAG 235
           Y A+RDYLMI++GMFQEIA++NA AV GL+P IS+WTNG       G GG N AMKE+AG
Sbjct: 389 YAALRDYLMINSGMFQEIARINADAVHGLQPKISIWTNGNSGEANDGTGGGN-AMKEVAG 447

Query: 234 VYRMLPPLLKTVQEQTGMAPPTWLGTFADS 145
           VY+MLPPL KTVQ+QTGM PP W+GT  DS
Sbjct: 448 VYKMLPPLFKTVQDQTGMLPPAWMGTLTDS 477


>ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|222855626|gb|EEE93173.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/95 (60%), Positives = 77/95 (81%), Gaps = 2/95 (2%)
 Frame = -3

Query: 414 YLAMRDYLMIDNGMFQEIAKVNAGAVAGLKPNISVWTNGE--QLSDGSGEGGCNSAMKEI 241
           Y A+RDYLMI++GM++EIAK+N+ AV GL+P IS+WTNG   + +DG+G G   +AMKE+
Sbjct: 390 YAALRDYLMINSGMYREIAKINSDAVQGLQPKISIWTNGNSGETNDGAGAG---NAMKEV 446

Query: 240 AGVYRMLPPLLKTVQEQTGMAPPTWLGTFADSRST 136
           AGVY+MLPPL +TVQEQTGM PP W+G+  DS ++
Sbjct: 447 AGVYKMLPPLFQTVQEQTGMLPPAWMGSLTDSSNS 481


>ref|NP_001237748.1| nodulin [Glycine max] gi|3851530|gb|AAC72337.1| nodulin [Glycine
           max]
          Length = 476

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/92 (63%), Positives = 70/92 (76%)
 Frame = -3

Query: 414 YLAMRDYLMIDNGMFQEIAKVNAGAVAGLKPNISVWTNGEQLSDGSGEGGCNSAMKEIAG 235
           Y  +RDYLMI++GMFQEIAK NA A+ GL+P IS+WTNG   +DG G G    AMK++AG
Sbjct: 389 YGNLRDYLMINSGMFQEIAKTNADAIRGLEPKISIWTNGGDTNDGYGSG----AMKDVAG 444

Query: 234 VYRMLPPLLKTVQEQTGMAPPTWLGTFADSRS 139
           VY+MLPPL KTV EQTGM PP W+GT  D+ S
Sbjct: 445 VYKMLPPLFKTVHEQTGMLPPAWMGTLPDNGS 476


>ref|XP_003590560.1| Flotillin-like protein [Medicago truncatula]
           gi|355479608|gb|AES60811.1| Flotillin-like protein
           [Medicago truncatula]
          Length = 449

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/92 (64%), Positives = 70/92 (76%)
 Frame = -3

Query: 414 YLAMRDYLMIDNGMFQEIAKVNAGAVAGLKPNISVWTNGEQLSDGSGEGGCNSAMKEIAG 235
           Y A+RDYLMI+ GMFQE+AK+NA AV GL+P IS+WTNG    D  GEG  +  MKE+AG
Sbjct: 363 YTALRDYLMINGGMFQEMAKINAEAVRGLEPKISIWTNG---GDNGGEG--SMGMKEVAG 417

Query: 234 VYRMLPPLLKTVQEQTGMAPPTWLGTFADSRS 139
           VY+MLPPL KTV EQTGM PP W+GT +D  S
Sbjct: 418 VYKMLPPLFKTVHEQTGMLPPAWIGTLSDKSS 449


>ref|XP_003603337.1| Flotillin-like protein [Medicago truncatula]
           gi|355492385|gb|AES73588.1| Flotillin-like protein
           [Medicago truncatula]
          Length = 959

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/92 (64%), Positives = 69/92 (75%)
 Frame = -3

Query: 414 YLAMRDYLMIDNGMFQEIAKVNAGAVAGLKPNISVWTNGEQLSDGSGEGGCNSAMKEIAG 235
           Y A+RDYLMI+ GMFQEIAK+NA AV GL+P IS+WTNG   S G G      AMKE+AG
Sbjct: 389 YTAVRDYLMINGGMFQEIAKINAEAVRGLEPKISIWTNGGDNSGGEG------AMKEVAG 442

Query: 234 VYRMLPPLLKTVQEQTGMAPPTWLGTFADSRS 139
           VY+MLPPL KTV EQTGM PP W+G+ +D  S
Sbjct: 443 VYKMLPPLFKTVHEQTGMLPPAWMGSLSDKTS 474



 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/92 (63%), Positives = 68/92 (73%)
 Frame = -3

Query: 414  YLAMRDYLMIDNGMFQEIAKVNAGAVAGLKPNISVWTNGEQLSDGSGEGGCNSAMKEIAG 235
            Y A+RDYLMI+ GMFQEIAK+NA AV GL+P IS+WTNG   + G  EG     MKE+AG
Sbjct: 870  YTAVRDYLMINGGMFQEIAKINAEAVRGLEPKISIWTNGGDNNGGITEGA--MGMKEVAG 927

Query: 234  VYRMLPPLLKTVQEQTGMAPPTWLGTFADSRS 139
            VY+MLPPL KTV EQTGM PP W+G+  D  S
Sbjct: 928  VYKMLPPLFKTVHEQTGMFPPAWMGSLPDKNS 959


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