BLASTX nr result

ID: Coptis25_contig00028509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028509
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892658.1| predicted protein [Arabidopsis lyrata subsp....   167   3e-39
gb|AAC17632.1| Similar to glucan endo-1,3-beta-D-glucosidase pre...   166   7e-39
ref|NP_172647.2| O-Glycosyl hydrolases family 17 protein [Arabid...   166   7e-39
ref|NP_001184967.1| O-Glycosyl hydrolases family 17 protein [Ara...   166   7e-39
gb|ADN34059.1| glucan endo-13-beta-glucosidase [Cucumis melo sub...   165   1e-38

>ref|XP_002892658.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338500|gb|EFH68917.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  167 bits (422), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 95/107 (88%)
 Frame = -3

Query: 373 ELKTQQEDNQPFVGINIGTEVSNLLSPKELVSFLQLQKITHIRIYDANPDILRALAHTKI 194
           ++K Q++D  PFVG NIGT+VSNLLSP ELV FLQ QK+ H+R+YDA+P++L+ALA TKI
Sbjct: 32  DIKVQEQDKDPFVGFNIGTDVSNLLSPTELVKFLQTQKVNHVRLYDADPELLKALAKTKI 91

Query: 193 RVIISVPNNQLLAIGSSNSTAATWVERNVVGFYPETLISGVSVGDEV 53
           RVIISVPNNQLLAIGSSNSTAA+W+ RNVV +YPETLI+ +SVGDEV
Sbjct: 92  RVIISVPNNQLLAIGSSNSTAASWIGRNVVAYYPETLITAISVGDEV 138


>gb|AAC17632.1| Similar to glucan endo-1,3-beta-D-glucosidase precursor gb|Z28697
           from Nicotiana tabacum. ESTs gb|Z18185 and gb|AA605362
           come from this gene [Arabidopsis thaliana]
          Length = 477

 Score =  166 bits (419), Expect = 7e-39
 Identities = 77/106 (72%), Positives = 94/106 (88%)
 Frame = -3

Query: 370 LKTQQEDNQPFVGINIGTEVSNLLSPKELVSFLQLQKITHIRIYDANPDILRALAHTKIR 191
           +K Q++D  PFVG NIGT+VSNLLSP ELV FLQ QK+ H+R+YDA+P++L+ALA TK+R
Sbjct: 33  IKVQEQDKDPFVGFNIGTDVSNLLSPTELVKFLQAQKVNHVRLYDADPELLKALAKTKVR 92

Query: 190 VIISVPNNQLLAIGSSNSTAATWVERNVVGFYPETLISGVSVGDEV 53
           VIISVPNNQLLAIGSSNSTAA+W+ RNVV +YPETLI+ +SVGDEV
Sbjct: 93  VIISVPNNQLLAIGSSNSTAASWIGRNVVAYYPETLITAISVGDEV 138


>ref|NP_172647.2| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
           gi|332190669|gb|AEE28790.1| O-Glycosyl hydrolases family
           17 protein [Arabidopsis thaliana]
          Length = 384

 Score =  166 bits (419), Expect = 7e-39
 Identities = 77/106 (72%), Positives = 94/106 (88%)
 Frame = -3

Query: 370 LKTQQEDNQPFVGINIGTEVSNLLSPKELVSFLQLQKITHIRIYDANPDILRALAHTKIR 191
           +K Q++D  PFVG NIGT+VSNLLSP ELV FLQ QK+ H+R+YDA+P++L+ALA TK+R
Sbjct: 33  IKVQEQDKDPFVGFNIGTDVSNLLSPTELVKFLQAQKVNHVRLYDADPELLKALAKTKVR 92

Query: 190 VIISVPNNQLLAIGSSNSTAATWVERNVVGFYPETLISGVSVGDEV 53
           VIISVPNNQLLAIGSSNSTAA+W+ RNVV +YPETLI+ +SVGDEV
Sbjct: 93  VIISVPNNQLLAIGSSNSTAASWIGRNVVAYYPETLITAISVGDEV 138


>ref|NP_001184967.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
           gi|357529541|sp|O65399.3|E131_ARATH RecName: Full=Glucan
           endo-1,3-beta-glucosidase 1; AltName:
           Full=(1->3)-beta-glucan endohydrolase 1;
           Short=(1->3)-beta-glucanase 1; AltName:
           Full=Beta-1,3-endoglucanase 1; Short=Beta-1,3-glucanase
           1; Flags: Precursor gi|332190670|gb|AEE28791.1|
           O-Glycosyl hydrolases family 17 protein [Arabidopsis
           thaliana]
          Length = 511

 Score =  166 bits (419), Expect = 7e-39
 Identities = 77/106 (72%), Positives = 94/106 (88%)
 Frame = -3

Query: 370 LKTQQEDNQPFVGINIGTEVSNLLSPKELVSFLQLQKITHIRIYDANPDILRALAHTKIR 191
           +K Q++D  PFVG NIGT+VSNLLSP ELV FLQ QK+ H+R+YDA+P++L+ALA TK+R
Sbjct: 33  IKVQEQDKDPFVGFNIGTDVSNLLSPTELVKFLQAQKVNHVRLYDADPELLKALAKTKVR 92

Query: 190 VIISVPNNQLLAIGSSNSTAATWVERNVVGFYPETLISGVSVGDEV 53
           VIISVPNNQLLAIGSSNSTAA+W+ RNVV +YPETLI+ +SVGDEV
Sbjct: 93  VIISVPNNQLLAIGSSNSTAASWIGRNVVAYYPETLITAISVGDEV 138


>gb|ADN34059.1| glucan endo-13-beta-glucosidase [Cucumis melo subsp. melo]
          Length = 523

 Score =  165 bits (417), Expect = 1e-38
 Identities = 77/106 (72%), Positives = 94/106 (88%)
 Frame = -3

Query: 370 LKTQQEDNQPFVGINIGTEVSNLLSPKELVSFLQLQKITHIRIYDANPDILRALAHTKIR 191
           +K +++D QPFVG+NIG++VSNLLSP +LVSFL  QKITHIR+YD NPDIL+AL  +KIR
Sbjct: 31  VKVEKDDKQPFVGVNIGSDVSNLLSPSDLVSFLHFQKITHIRLYDTNPDILKALKGSKIR 90

Query: 190 VIISVPNNQLLAIGSSNSTAATWVERNVVGFYPETLISGVSVGDEV 53
           V+ISVPNNQLLAIG SN+TAA W+ RNVV +YP+TLISG+SVGDEV
Sbjct: 91  VVISVPNNQLLAIGYSNTTAAAWIARNVVAYYPQTLISGISVGDEV 136


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