BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028508
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein ...    74   1e-11
ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...    73   3e-11
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...    72   6e-11
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab...    71   8e-11
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....    71   8e-11

>ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 108

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 30/61 (49%), Positives = 47/61 (77%)
 Frame = -1

Query: 185 TRGFCSRLFVSNMSFYSNESDLINLFSPFGKVKDAKLVMDYRTNRPKGFGFISFESEEQA 6
           T+GF + +FVS +SFY+ E +L N+FSPFG +++A+L+ D +T RPKGFGF+ + S+  A
Sbjct: 21  TKGFSTEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAA 80

Query: 5   Q 3
           +
Sbjct: 81  E 81


>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/63 (52%), Positives = 46/63 (73%)
 Frame = -1

Query: 191 LCTRGFCSRLFVSNMSFYSNESDLINLFSPFGKVKDAKLVMDYRTNRPKGFGFISFESEE 12
           +C RG  S+LFV  +SFY+ E  L   FS +G+V +AK+VMD  ++R KGFGF++F SEE
Sbjct: 27  ICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEE 86

Query: 11  QAQ 3
           +AQ
Sbjct: 87  EAQ 89


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = -1

Query: 170 SRLFVSNMSFYSNESDLINLFSPFGKVKDAKLVMDYRTNRPKGFGFISFESEEQAQ 3
           S+LFV  +S Y+    L  LFSPFG VK+A+LV+D RT +PKGFGF++F+SE QAQ
Sbjct: 7   SQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQ 62


>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
           lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
           ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/56 (55%), Positives = 44/56 (78%)
 Frame = -1

Query: 170 SRLFVSNMSFYSNESDLINLFSPFGKVKDAKLVMDYRTNRPKGFGFISFESEEQAQ 3
           ++LFVS +S Y+ +  L  LFSPFG++K+A+L+ D  T RPKGFGFI+FESE+ A+
Sbjct: 7   AQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDAR 62


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/58 (53%), Positives = 45/58 (77%)
 Frame = -1

Query: 176 FCSRLFVSNMSFYSNESDLINLFSPFGKVKDAKLVMDYRTNRPKGFGFISFESEEQAQ 3
           F ++LFVS +S Y+ +  L  LF+PFG++ +A+L+ D +T RPKGFGFI+FESE+ AQ
Sbjct: 5   FTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQ 62