BLASTX nr result

ID: Coptis25_contig00028504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028504
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274551.1| PREDICTED: uncharacterized protein LOC100267...    92   4e-17
ref|XP_002528390.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_004146667.1| PREDICTED: uncharacterized protein LOC101206...    68   7e-10
ref|XP_003610259.1| hypothetical protein MTR_4g130250 [Medicago ...    65   4e-09
ref|NP_001078473.1| uncharacterized protein [Arabidopsis thalian...    65   7e-09

>ref|XP_002274551.1| PREDICTED: uncharacterized protein LOC100267275 [Vitis vinifera]
           gi|297743698|emb|CBI36581.3| unnamed protein product
           [Vitis vinifera]
          Length = 117

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/80 (56%), Positives = 59/80 (73%)
 Frame = +1

Query: 43  MVITQNSFLFSTPSTSLVTWRNSRKLKHTLAKKQDSTDNFKSQQQQPFLTLRVPNVFIAR 222
           M++TQ++F+F+T    L   +N  K + TLA+K+D++ N  +QQQQ  L LRV N  +AR
Sbjct: 1   MLVTQDTFIFNTLPPYLFHIKNGTKFRPTLAQKRDASKNSSTQQQQSILPLRVSNTILAR 60

Query: 223 SVIAVLGLGFIDAGYSGDWS 282
           S IAVLGLGFIDAGYSGDWS
Sbjct: 61  SAIAVLGLGFIDAGYSGDWS 80


>ref|XP_002528390.1| conserved hypothetical protein [Ricinus communis]
           gi|223532178|gb|EEF33983.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
 Frame = +1

Query: 37  MKMVITQNSFLFSTPSTSLVTWRNSRK-----LKHTLAKKQDSTDNFKSQQQQPFLTLRV 201
           MK  +  N+ L S+ S+S + +  ++K     +  T+AKK+DS +N ++QQQ   L L++
Sbjct: 4   MKTTLFFNNSLSSSSSSSSLPYHPTKKNGQKYIIITVAKKKDSPENSRTQQQNSILPLKI 63

Query: 202 PNVFIARSVIAVLGLGFIDAGYSGDWS 282
               +A+S IAV GLGFIDAGYSGDWS
Sbjct: 64  SYRALAKSAIAVFGLGFIDAGYSGDWS 90


>ref|XP_004146667.1| PREDICTED: uncharacterized protein LOC101206545 [Cucumis sativus]
           gi|449503149|ref|XP_004161858.1| PREDICTED:
           uncharacterized LOC101206545 [Cucumis sativus]
          Length = 126

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
 Frame = +1

Query: 43  MVITQNSFLF---STPSTSLVTWRNSRKLKHTLAKKQDSTDNFKSQQQQP----FLTLRV 201
           M +  +SF+F   S     L+   N RK   T AK+   +D+  +   QP    F +LRV
Sbjct: 1   MAMVDSSFIFIGFSPVPHPLLNNNNGRKFGITSAKRTQDSDSDSASSTQPNQFKFPSLRV 60

Query: 202 PNVFIARSVIAVLGLGFIDAGYSGDWS 282
            N  +ARSV++VLGLGF+DAGYSGDWS
Sbjct: 61  SNPLLARSVVSVLGLGFVDAGYSGDWS 87


>ref|XP_003610259.1| hypothetical protein MTR_4g130250 [Medicago truncatula]
           gi|355511314|gb|AES92456.1| hypothetical protein
           MTR_4g130250 [Medicago truncatula]
          Length = 113

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/82 (46%), Positives = 47/82 (57%)
 Frame = +1

Query: 37  MKMVITQNSFLFSTPSTSLVTWRNSRKLKHTLAKKQDSTDNFKSQQQQPFLTLRVPNVFI 216
           M+++    S L  TPS S       R+    LAKK+D   +    QQQ FL L+V    +
Sbjct: 1   MEVIGRSFSVLCLTPSLSA-----RRRFCTALAKKKDDVQDNNESQQQSFLPLKVSKSNL 55

Query: 217 ARSVIAVLGLGFIDAGYSGDWS 282
           AR+ I V GLGFIDAGYSGDWS
Sbjct: 56  ARAAIGVFGLGFIDAGYSGDWS 77


>ref|NP_001078473.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332660418|gb|AEE85818.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 114

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +1

Query: 130 LAKKQDSTDNFKSQQQQPFLTLRVPNVFIARSVIAVLGLGFIDAGYSGDWS 282
           ++K++D ++  KS +++P L ++VPN  +ARS IAVL LGFIDAGYSGDWS
Sbjct: 29  MSKRRDFSE--KSNEERPILRIKVPNTIVARSAIAVLSLGFIDAGYSGDWS 77


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