BLASTX nr result

ID: Coptis25_contig00028502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028502
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX85638.1| putative transposase [Cucumis melo]                    146   2e-33
emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   133   2e-29
ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   121   7e-26
ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  146 bits (369), Expect = 2e-33
 Identities = 75/172 (43%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
 Frame = +1

Query: 28  KRKSFSSPA*--DHFHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXX 201
           KRK    P+   +HF K+EGCDPK PRA C +C  SYAC SK +GT+N+  H+       
Sbjct: 21  KRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHL---EKCK 77

Query: 202 XXXXXADKSQQTLSFKDKELVAISFSIKACRDALSRMIIVDELPFSFVEGEGFRHFVKVI 381
                 + + +     +  L+  SF+ + CR  L+RM+I+DELPF FVE EGF  F + +
Sbjct: 78  MYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 137

Query: 382 QPKFTNLPYRTQVGRDCIELYMEERRKLKSFL--HGNRICITTDT*TSIQNL 531
            PKF  +P R  V +DC ++YM+E++KLK+ L   G R+C+TTDT TS+QN+
Sbjct: 138 NPKFV-IPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNI 188


>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  133 bits (334), Expect = 2e-29
 Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 14/165 (8%)
 Frame = +1

Query: 25  NKRKSFSSPA*--DHFHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXX 198
           +KRK    P+   DHF K++ CDP  PRA CNYC + YAC  K + TSNM +H+      
Sbjct: 27  SKRKPTKPPSEVWDHFTKVKECDPNYPRATCNYCGIDYACHDKRNETSNMKAHLASGCQK 86

Query: 199 XXXXXXADKSQQTLSFKDKE------------LVAISFSIKACRDALSRMIIVDELPFSF 342
                  D  Q+TLSF+ K             L+A SF+++ CR  L+RMIIVDEL F F
Sbjct: 87  HPFRCK-DPKQKTLSFQSKNKEGEGEGDSGYTLLATSFNVEHCRKMLARMIIVDELAFRF 145

Query: 343 VEGEGFRHFVKVIQPKFTNLPYRTQVGRDCIELYMEERRKLKSFL 477
           V+GEGFR F   +QPKF  +P R  V +DC +LY  E++KLKS L
Sbjct: 146 VQGEGFRAFCSPLQPKFF-IPSRATVAKDCSQLYSSEKKKLKSVL 189


>ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|222857665|gb|EEE95212.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  130 bits (328), Expect = 9e-29
 Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 12/170 (7%)
 Frame = +1

Query: 58  DHFHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXXXXXXXADKSQQT 237
           DHF K++G DP   RA+ NYC   YAC +  +GTSNM SH+              K Q+ 
Sbjct: 64  DHFTKLDG-DPTTSRAEYNYCGKDYACHTIINGTSNMWSHLKVCKKFPFVVI---KKQKI 119

Query: 238 LSFKDKE------------LVAISFSIKACRDALSRMIIVDELPFSFVEGEGFRHFVKVI 381
           L  +  +            L AI +    CR AL +M+I+DELPF+F+EG+GFR F + +
Sbjct: 120 LVLEPNKVGGELGDRSVGTLKAIGYEYDECRKALVKMVIIDELPFNFMEGKGFRLFSRTL 179

Query: 382 QPKFTNLPYRTQVGRDCIELYMEERRKLKSFLHGNRICITTDT*TSIQNL 531
           QP+F ++P R  V RDC++L++EE+ +LK  L G R+C+TTDT TSIQN+
Sbjct: 180 QPRF-DIPSRFTVMRDCLKLHVEEKERLKRDLKGQRLCLTTDTWTSIQNI 228


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  121 bits (303), Expect = 7e-26
 Identities = 74/170 (43%), Positives = 99/170 (58%), Gaps = 12/170 (7%)
 Frame = +1

Query: 58   DHFHKMEGCDPKNPRAKCNYCP-VSYACASKGSGTSNMLSHMXXXXXXXXXXXXA--DKS 228
            DHF K +G      RA C +C   SYA  S  SGTSN+ +H+               D +
Sbjct: 962  DHFIKEKG------RAMCKWCKNASYAADSHNSGTSNLSTHLRKQCKKFPKHLDPNYDPN 1015

Query: 229  QQTLSFKDKE-------LVAISFSIKACRDALSRMIIVDELPFSFVEGEGFRHFVKVIQP 387
            Q  LS +D +       +VA+ F +   R AL+RMIIVDELPFSFVE EGFR+F+ V QP
Sbjct: 1016 QTILSLQDSKGTSSNSTIVAVHFDVDVSRQALARMIIVDELPFSFVENEGFRYFMSVTQP 1075

Query: 388  KFTNLPYRTQVGRDCIELYMEERRKLKS-FLHGNR-ICITTDT*TSIQNL 531
            +   LP R  + RDC+ LY  E+ KL++ F   N+ +C+TTDT TS+QN+
Sbjct: 1076 RLP-LPGRLAIARDCLNLYTSEKHKLRNMFTKANQSVCLTTDTWTSVQNI 1124


>ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|222837471|gb|EEE75850.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 12/152 (7%)
 Frame = +1

Query: 58  DHFHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXXXXXXXADKSQQT 237
           DHF K++  DPK PRA+CNYC   YAC +  +GTSNM SH+             DK Q+ 
Sbjct: 64  DHFTKLD-VDPKAPRAECNYCGKHYACHTIVNGTSNMWSHLKVCKKFPFV---VDKKQKV 119

Query: 238 LSFKDK------------ELVAISFSIKACRDALSRMIIVDELPFSFVEGEGFRHFVKVI 381
           L  + K             L AI ++   CR  L++M+I+DELPF+FVEG GF+ F + +
Sbjct: 120 LVLESKIENGELGEQNVGSLKAIGYNYDECRQTLAKMVIIDELPFNFVEGRGFKLFARTM 179

Query: 382 QPKFTNLPYRTQVGRDCIELYMEERRKLKSFL 477
           QP+F ++P R  + RDC++LY+EE+ +L++ L
Sbjct: 180 QPRF-DIPSRFTIMRDCLKLYVEEKDRLRTAL 210


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