BLASTX nr result

ID: Coptis25_contig00028492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028492
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776...   103   1e-19
ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19
ref|XP_002526571.1| protein with unknown function [Ricinus commu...    90   1e-15
ref|XP_004157745.1| PREDICTED: uncharacterized LOC101222251 [Cuc...    82   3e-13
ref|XP_004145457.1| PREDICTED: uncharacterized protein LOC101222...    80   9e-13

>ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776739 [Glycine max]
          Length = 870

 Score =  103 bits (257), Expect = 1e-19
 Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
 Frame = +2

Query: 26   VFGAETYCGDHGDSDASYDLMPSIAXXXXXXXXXXXXXVGKYIFNEVDWSMKEFLRKLME 205
            +F A ++C D  D++  +D MPS               + +    EV+W M   LR+LME
Sbjct: 576  IFSA-SHCNDQFDANTVHDPMPSGIFQVLFLELKKIEQLEEENVFEVNWLMG-LLRELME 633

Query: 206  TFFVWLENNQDFWTTIEENSTFEHSYGFEQFVLDMQFLVEITRFGGYYSSNLSDASSALI 385
            + F+W+ NN++   T E+N + +     +QF+LD+QFLVEI  +GGY+SS+       L+
Sbjct: 634  SMFIWVSNNKEILATTEKNVSSQTDEA-KQFILDVQFLVEIGMYGGYFSSD----PLLLL 688

Query: 386  SRMESVFLSAGVETHRDVLCD-GATNAATESIQKLLENEKSDLLHNEEDMSTSEEDPSTH 562
            + M+S F SAG++  +DV  D  A +AAT++IQKLLE EK+  LH +E + T +E+   H
Sbjct: 689  TLMKSTFNSAGLDPFKDVDDDYWAIDAATKTIQKLLEIEKTS-LHPKEPVVTIKEESHEH 747

Query: 563  QDVFGADSVE 592
            ++     + E
Sbjct: 748  ENQINQSAYE 757


>ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|222862080|gb|EEE99622.1|
            predicted protein [Populus trichocarpa]
          Length = 897

 Score =  102 bits (254), Expect = 2e-19
 Identities = 81/297 (27%), Positives = 140/297 (47%), Gaps = 18/297 (6%)
 Frame = +2

Query: 62   DSDASYDLMPSIAXXXXXXXXXXXXXVGKYIFNEVDWSMKEFLRKLMETFFVWLENNQDF 241
            D    +DL+PS+A             +      E+DW M E +R+L+E  FVW+ N+++ 
Sbjct: 575  DPGLVHDLVPSVAFQVLFLELRKLGKLTDEDVFEMDWLM-ELMRELIEAIFVWISNDKEI 633

Query: 242  WTTIEENSTFEHSYGFEQFVLDMQFLVEITRFGGYYSSNLSDASSALISRMESVFLSAGV 421
            W  IEE    EH     QFVLDM FL EI RFG Y+S+N     S   + M+SVF SAG+
Sbjct: 634  WGNIEEKLNLEHPDIRNQFVLDMHFLAEIIRFGDYFSTN----PSVPATLMKSVFDSAGL 689

Query: 422  ETHRDVLCDGATNAATESIQKLLENEKSDLLHNEEDMSTSEEDPSTHQDVFGADSV-ENV 598
            +  RD        AA E+I++L++ E+++   ++E +    E+P  +     +++V ++ 
Sbjct: 690  DPTRDADDGWIMKAAIEAIERLVKIEETESPSDDELVGIPVEEPPENHSEHASETVNDDG 749

Query: 599  KNLLEDSTELDDGLTSNAADAAVAVVK---EIQSSEDTTGQEPLCLRYE----------- 736
                EDS  L++   +  A   V++ K    + +  +  GQ P  L+ +           
Sbjct: 750  TYFSEDSLMLEENAATTGA-LEVSIGKGNANLNAELNHAGQSPDLLKDKGSINNGTTCLT 808

Query: 737  ---ENMLDDEDALSSTDRFVPEERTEITNADNGAIMIGENIGNREESALESSPSTLV 898
                NM D E   ++ D+F  ++ T + +     ++  E +    E  L +    ++
Sbjct: 809  DVFGNMEDVESGKAAYDKFHFDQETILPH-----LLFSETVNEASEVGLPTESKEMM 860


>ref|XP_002526571.1| protein with unknown function [Ricinus communis]
            gi|223534132|gb|EEF35849.1| protein with unknown function
            [Ricinus communis]
          Length = 804

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
 Frame = +2

Query: 161  EVDWSMKEFLRKLMETFFVWLENNQDFWTTIEENSTFEHSYGFEQFVLDMQFLVEITRFG 340
            E  W M + +R+L+E  F W+ +N+  W T + +  F+H    +QFVLDM FLVE  ++G
Sbjct: 646  EAKWLM-QLIRELIEAIFAWISSNKKIWETDKGDLNFQHPEISDQFVLDMHFLVEAIKYG 704

Query: 341  GYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDG-ATNAATESIQKLLENEKSDLLH 517
             Y+S +         + M+    SAG++  RD+  DG A  AATE+++KLLE EK++LL 
Sbjct: 705  EYFSKD----PLVPATLMKEAINSAGLDPFRDIYDDGWAMKAATEAVEKLLEIEKTELLL 760

Query: 518  NE---EDMSTSEEDPSTHQDVFGADSVENVKNLLEDSTELDD 634
             +   ED++   ++   H      D+  +  ++   S E D+
Sbjct: 761  EDEAAEDLAVPSKNHFEHASDTFQDAARSSLDIFSSSEEDDE 802


>ref|XP_004157745.1| PREDICTED: uncharacterized LOC101222251 [Cucumis sativus]
          Length = 773

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
 Frame = +2

Query: 179  KEFLRKLMETFFVWLENNQDFWTTIEENSTFEHSYGFEQFVLDMQFLVEITRFGGYYSSN 358
            K  L +L ETF +WL ++QDFW   E+NS      G +Q +LDM F VEI RF GY S  
Sbjct: 609  KILLARLTETFLIWLSDDQDFWGVFEDNSINLLPIGLQQLILDMHFTVEIARFAGYPSRQ 668

Query: 359  LSDASSALISRMESVFLSAGVETHRDVLCD-GATNAATESIQKLLENEKSDLLHNEEDMS 535
            +   +SA+I+R    F + G++    +  D      A  +I KLL  + SD    ++D  
Sbjct: 669  IHQIASAIIARAIRTFSARGIDPQSALPEDEWFVETAKSAINKLLGADGSDGSEIDDDHI 728

Query: 536  TSEEDPSTHQDVFGADSVENVKNLLEDSTELDDGLTSNAADAAVAVVKEIQSSEDTTGQE 715
               +D     DV  +D   +  + LE STE            A A + E++S  D T  E
Sbjct: 729  ILHDD-----DVSDSDDTTSSLSTLE-STE----------SFASASMGELESPSDLTDSE 772


>ref|XP_004145457.1| PREDICTED: uncharacterized protein LOC101222251 [Cucumis sativus]
          Length = 776

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
 Frame = +2

Query: 179  KEFLRKLMETFFVWLENNQDFWTTIEENSTFEHSYGFEQFVLDMQFLVEITRFGGYYSSN 358
            K  L +L ETF +WL ++QDFW   E+NS      G +Q +LDM F VEI RF GY S  
Sbjct: 609  KILLARLTETFLIWLSDDQDFWGVFEDNSINLLPIGLQQLILDMHFTVEIARFAGYPSRQ 668

Query: 359  LSDASSALISRMESVFLSAGVETHRDVLCD-GATNAATESIQKLLENEKSD--------- 508
            +   +SA+I+R    F + G++    +  D      A  +I KLL  + SD         
Sbjct: 669  IHQIASAIIARAIRTFSARGIDPQSALPEDEWFVETAKSAINKLLGADGSDGSDGSEIDD 728

Query: 509  --LLHNEEDMSTSEEDPSTHQDVFGADSVENVK-NLLEDSTELDD 634
              ++ +++D+S S++  S+   +   +S  +     LE  ++L D
Sbjct: 729  DHIILHDDDVSDSDDTTSSLSTLESTESFASASMGELESPSDLTD 773


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