BLASTX nr result

ID: Coptis25_contig00028489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028489
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83669.1| hypothetical protein VITISV_027696 [Vitis vinifera]   221   1e-55
ref|XP_002273881.1| PREDICTED: uncharacterized protein LOC100248...   219   3e-55
emb|CBI31815.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|XP_002321901.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48
ref|XP_004170342.1| PREDICTED: uncharacterized protein LOC101226...   190   2e-46

>emb|CAN83669.1| hypothetical protein VITISV_027696 [Vitis vinifera]
          Length = 446

 Score =  221 bits (562), Expect = 1e-55
 Identities = 103/152 (67%), Positives = 124/152 (81%)
 Frame = -3

Query: 608 DKFVGNFGLERPDFVMLRFWCLMGPGVL*IVTLHRNLQMFLNEAVLSWYQRLHASKVPDL 429
           DK V N G+ + DF  LR WCL+  G+L +V L  NLQM+LNEAVLSWYQRLH+SKVPDL
Sbjct: 295 DKLVENLGISQSDFEKLRVWCLLLSGILQVVALRPNLQMYLNEAVLSWYQRLHSSKVPDL 354

Query: 428 DFSRAKIFLHNYYLCLVVLQFLIPPALVLLFLGLSKVEGNLLDTFPFICSFVPCSAFVKE 249
           DFSRAK+FLHN+YLCLVVLQF  PPALVLLFLGLS+VE NL + F FI S +PCSA  KE
Sbjct: 355 DFSRAKVFLHNHYLCLVVLQFFAPPALVLLFLGLSQVESNLFENFQFISSLLPCSASFKE 414

Query: 248 VALFMSWWIAFVWSIFTLSTLVVYRCGLLYVS 153
           VAL ++WW+ FVW+IFT ++L++YR G+LYVS
Sbjct: 415 VALLLAWWVVFVWAIFTSASLLLYRRGILYVS 446


>ref|XP_002273881.1| PREDICTED: uncharacterized protein LOC100248574 [Vitis vinifera]
          Length = 446

 Score =  219 bits (558), Expect = 3e-55
 Identities = 102/152 (67%), Positives = 123/152 (80%)
 Frame = -3

Query: 608 DKFVGNFGLERPDFVMLRFWCLMGPGVL*IVTLHRNLQMFLNEAVLSWYQRLHASKVPDL 429
           DK V N G+ + DF  LR WCL+  G+L +V L  NLQM+LNEAVLSWYQRLH+SKVPDL
Sbjct: 295 DKLVENLGISQSDFEKLRVWCLLLSGILQVVALRPNLQMYLNEAVLSWYQRLHSSKVPDL 354

Query: 428 DFSRAKIFLHNYYLCLVVLQFLIPPALVLLFLGLSKVEGNLLDTFPFICSFVPCSAFVKE 249
           DFSRAK+FLHN+Y CLVVLQF  PPALVLLFLGLS+VE NL + F FI S +PCSA  KE
Sbjct: 355 DFSRAKVFLHNHYFCLVVLQFFAPPALVLLFLGLSQVESNLFENFQFISSLLPCSASFKE 414

Query: 248 VALFMSWWIAFVWSIFTLSTLVVYRCGLLYVS 153
           VAL ++WW+ FVW+IFT ++L++YR G+LYVS
Sbjct: 415 VALLLAWWVVFVWAIFTSASLLLYRRGILYVS 446


>emb|CBI31815.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  202 bits (515), Expect = 3e-50
 Identities = 94/136 (69%), Positives = 113/136 (83%)
 Frame = -3

Query: 560 LRFWCLMGPGVL*IVTLHRNLQMFLNEAVLSWYQRLHASKVPDLDFSRAKIFLHNYYLCL 381
           LR WCL+  G+L +V L  NLQM+LNEAVLSWYQRLH+SKVPDLDFSRAK+FLHN+Y CL
Sbjct: 244 LRVWCLLLSGILQVVALRPNLQMYLNEAVLSWYQRLHSSKVPDLDFSRAKVFLHNHYFCL 303

Query: 380 VVLQFLIPPALVLLFLGLSKVEGNLLDTFPFICSFVPCSAFVKEVALFMSWWIAFVWSIF 201
           VVLQF  PPALVLLFLGLS+VE NL + F FI S +PCSA  KEVAL ++WW+ FVW+IF
Sbjct: 304 VVLQFFAPPALVLLFLGLSQVESNLFENFQFISSLLPCSASFKEVALLLAWWVVFVWAIF 363

Query: 200 TLSTLVVYRCGLLYVS 153
           T ++L++YR G+LY S
Sbjct: 364 TSASLLLYRRGILYNS 379


>ref|XP_002321901.1| predicted protein [Populus trichocarpa] gi|222868897|gb|EEF06028.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  196 bits (497), Expect = 4e-48
 Identities = 92/152 (60%), Positives = 111/152 (73%)
 Frame = -3

Query: 608 DKFVGNFGLERPDFVMLRFWCLMGPGVL*IVTLHRNLQMFLNEAVLSWYQRLHASKVPDL 429
           +  VGN G    DF   R  CL   G+  I+ L  N+QM+LNEA+LSWYQRLHASK+PDL
Sbjct: 323 EMLVGNVGFTESDFNKFRLCCLFLSGIFQILALRPNVQMYLNEALLSWYQRLHASKIPDL 382

Query: 428 DFSRAKIFLHNYYLCLVVLQFLIPPALVLLFLGLSKVEGNLLDTFPFICSFVPCSAFVKE 249
           DFSRAK+FLHN+YLCLVVLQF   P LVLLFL LS+++G+        C F+PC+AFVKE
Sbjct: 383 DFSRAKVFLHNHYLCLVVLQFFAMPILVLLFLSLSQIDGDSFKKLHLWCDFIPCTAFVKE 442

Query: 248 VALFMSWWIAFVWSIFTLSTLVVYRCGLLYVS 153
           V LFM+WWI FVW+ FT ++LV YR G LYVS
Sbjct: 443 VTLFMAWWIVFVWAAFTSTSLVFYRWGTLYVS 474


>ref|XP_004170342.1| PREDICTED: uncharacterized protein LOC101226333 [Cucumis sativus]
          Length = 467

 Score =  190 bits (483), Expect = 2e-46
 Identities = 87/152 (57%), Positives = 114/152 (75%)
 Frame = -3

Query: 608 DKFVGNFGLERPDFVMLRFWCLMGPGVL*IVTLHRNLQMFLNEAVLSWYQRLHASKVPDL 429
           D+ VG+ G  + DF  LR WCL   G L I+ + +NLQM+LNEA+LSWYQRLHA KVPDL
Sbjct: 316 DRLVGSIGFSKEDFAKLRLWCLTLSGFLQIIAVRQNLQMYLNEALLSWYQRLHAGKVPDL 375

Query: 428 DFSRAKIFLHNYYLCLVVLQFLIPPALVLLFLGLSKVEGNLLDTFPFICSFVPCSAFVKE 249
           DFSRAK+FLHN+YLC+  LQF  PPALVLLF+GLS+++ N       +   +PCS+FV +
Sbjct: 376 DFSRAKVFLHNHYLCVSALQFFAPPALVLLFVGLSQIDINSFKNTNLVSFLLPCSSFVNQ 435

Query: 248 VALFMSWWIAFVWSIFTLSTLVVYRCGLLYVS 153
           VAL M+WWI  V +++T +T+V+YR G+LYVS
Sbjct: 436 VALLMAWWIVSVLTLYTSATIVLYRRGILYVS 467


Top