BLASTX nr result

ID: Coptis25_contig00028487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028487
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
emb|CAN69406.1| hypothetical protein VITISV_042543 [Vitis vinifera]    79   3e-13
emb|CBI20922.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus c...    77   1e-12
emb|CBI36241.3| unnamed protein product [Vitis vinifera]               74   9e-12

>ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|222865685|gb|EEF02816.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/99 (44%), Positives = 63/99 (63%)
 Frame = +3

Query: 3   QEFVLQAFQVNCTVRAIPRNAFSSRYGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPL 182
           ++ + QAF+ +CT + I R A SS + G+AF IF+ ++VAEM +  L + CLML NG PL
Sbjct: 395 EDLIWQAFKQSCTAKMIQRTARSSPHSGQAFVIFQKREVAEMAVAKLDEVCLMLSNGRPL 454

Query: 183 VACVEAPRAHGKQAKHIGHLSIEKALQKHRGEKRDAVST 299
           V  + AP   GKQ+   GHL+I K     + E ++AVST
Sbjct: 455 VGSIAAPCFPGKQSTFFGHLTINKLRIHMQREMKEAVST 493


>emb|CAN69406.1| hypothetical protein VITISV_042543 [Vitis vinifera]
          Length = 417

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/99 (40%), Positives = 58/99 (58%)
 Frame = +3

Query: 3   QEFVLQAFQVNCTVRAIPRNAFSSRYGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPL 182
           ++ V   F+ +CT R I R   SS + G+AF IFK++  A   +  L++ CL+L NG PL
Sbjct: 236 EDIVWHGFKESCTARMIQRTTISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPL 295

Query: 183 VACVEAPRAHGKQAKHIGHLSIEKALQKHRGEKRDAVST 299
           V     P   GKQ+  +GHLSI+K   + + E + AVST
Sbjct: 296 VGSFGTPCFPGKQSTFVGHLSIDKVKVQMQREMKQAVST 334


>emb|CBI20922.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/99 (40%), Positives = 58/99 (58%)
 Frame = +3

Query: 3   QEFVLQAFQVNCTVRAIPRNAFSSRYGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPL 182
           ++ V   F+ +CT R I   A SS + G+AF IFK++  A   +  L++ CL+L NG PL
Sbjct: 481 EDIVWHGFKESCTARMIQHTAISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPL 540

Query: 183 VACVEAPRAHGKQAKHIGHLSIEKALQKHRGEKRDAVST 299
           V     P   GKQ+  +GHLSI+K   + + E + AVST
Sbjct: 541 VGSFGTPCFPGKQSTFVGHLSIDKVKVQMQREMKQAVST 579


>ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus communis]
           gi|223544403|gb|EEF45924.1| hypothetical protein
           RCOM_0803370 [Ricinus communis]
          Length = 730

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/99 (39%), Positives = 59/99 (59%)
 Frame = +3

Query: 3   QEFVLQAFQVNCTVRAIPRNAFSSRYGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPL 182
           ++ V  A + +CT + IP  AFSS + G+AFAIFK+++ AE  +  L + CLM   G PL
Sbjct: 581 EDIVWHALKQSCTAKMIPCTAFSSPHSGQAFAIFKTREAAETAVTKLDEGCLMTSYGRPL 640

Query: 183 VACVEAPRAHGKQAKHIGHLSIEKALQKHRGEKRDAVST 299
           V  +      GK + + GH+SI+K   + +   R+AVST
Sbjct: 641 VGSIAKLSFPGKPSTYFGHMSIDKTRHQMQRVMREAVST 679


>emb|CBI36241.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   QEFVLQAFQVNCTVRAIPRNAFSSRYGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPL 182
           ++ V  AF V  T + I    FSS + G+AF IFK K  A+MV+  L  KCLML +G P+
Sbjct: 369 EDLVWHAFNVRATAKMIQCGTFSSPHNGKAFVIFKLKATADMVISQLNAKCLMLADGRPV 428

Query: 183 VACVEAPRAHGKQAKHIGHLSIEK-ALQKHRGEKRDAVST 299
           V   +AP    K A  +GHL I+K   Q+     R+AVST
Sbjct: 429 VGHRKAPTDPSKPASFVGHLFIDKIRFQRQPEYMRNAVST 468


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