BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028474
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFL55357.1| Fanconia anemia complementation group M-like prot...   336   2e-90
ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis tha...   335   5e-90
ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis ...   335   5e-90
ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arab...   335   5e-90
ref|XP_002526811.1| protein with unknown function [Ricinus commu...   331   1e-88

>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
           thaliana]
          Length = 1344

 Score =  336 bits (862), Expect = 2e-90
 Identities = 173/220 (78%), Positives = 184/220 (83%), Gaps = 12/220 (5%)
 Frame = +2

Query: 83  RQSTLDSFIQRNNH----------CQVVGNEESNNLGCYCAIDLEAAKTWIYPVN--IPL 226
           RQSTLD FI R  H          C V  N+ S  +G    ID EAAKTWIYPVN  +PL
Sbjct: 62  RQSTLDKFIGRTEHKPENHQVVSECGVNDNDNSPLVG----IDPEAAKTWIYPVNGSVPL 117

Query: 227 RDYQLSITKTALFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQI 406
           RDYQ +ITKTALF+NTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQI
Sbjct: 118 RDYQFAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQI 177

Query: 407 EACHNTVGIPQEWAIDLTGQTNPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCL 586
           EACHN VGIPQEW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LVCL
Sbjct: 178 EACHNIVGIPQEWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCL 237

Query: 587 VIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSK 706
           VIDEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK
Sbjct: 238 VIDEAHRALGNYSYCVVVRELMAVPIQLRILALTATPGSK 277


>ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis thaliana]
           gi|332193685|gb|AEE31806.1| fanconi anemia group M
           protein [Arabidopsis thaliana]
          Length = 1324

 Score =  335 bits (859), Expect = 5e-90
 Identities = 171/218 (78%), Positives = 182/218 (83%), Gaps = 10/218 (4%)
 Frame = +2

Query: 83  RQSTLDSFIQRNNH----------CQVVGNEESNNLGCYCAIDLEAAKTWIYPVNIPLRD 232
           RQSTLD FI R  H          C V  N+ S  +G    ID EAAKTWIYP  +PLRD
Sbjct: 62  RQSTLDKFIGRTEHKPENHQVVSECGVNDNDNSPLVG----IDPEAAKTWIYPGFVPLRD 117

Query: 233 YQLSITKTALFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEA 412
           YQ +ITKTALF+NTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQIEA
Sbjct: 118 YQFAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEA 177

Query: 413 CHNTVGIPQEWAIDLTGQTNPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCLVI 592
           CHN VGIPQEW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LVCLVI
Sbjct: 178 CHNIVGIPQEWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVI 237

Query: 593 DEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSK 706
           DEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK
Sbjct: 238 DEAHRALGNYSYCVVVRELMAVPIQLRILALTATPGSK 275


>ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
           gi|332193686|gb|AEE31807.1| fanconi anemia group M
           protein [Arabidopsis thaliana]
          Length = 1390

 Score =  335 bits (859), Expect = 5e-90
 Identities = 171/218 (78%), Positives = 182/218 (83%), Gaps = 10/218 (4%)
 Frame = +2

Query: 83  RQSTLDSFIQRNNH----------CQVVGNEESNNLGCYCAIDLEAAKTWIYPVNIPLRD 232
           RQSTLD FI R  H          C V  N+ S  +G    ID EAAKTWIYP  +PLRD
Sbjct: 62  RQSTLDKFIGRTEHKPENHQVVSECGVNDNDNSPLVG----IDPEAAKTWIYPGFVPLRD 117

Query: 233 YQLSITKTALFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEA 412
           YQ +ITKTALF+NTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQIEA
Sbjct: 118 YQFAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEA 177

Query: 413 CHNTVGIPQEWAIDLTGQTNPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCLVI 592
           CHN VGIPQEW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LVCLVI
Sbjct: 178 CHNIVGIPQEWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVI 237

Query: 593 DEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSK 706
           DEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK
Sbjct: 238 DEAHRALGNYSYCVVVRELMAVPIQLRILALTATPGSK 275


>ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arabidopsis lyrata subsp.
           lyrata] gi|297337031|gb|EFH67448.1| hypothetical protein
           ARALYDRAFT_473682 [Arabidopsis lyrata subsp. lyrata]
          Length = 1321

 Score =  335 bits (859), Expect = 5e-90
 Identities = 173/222 (77%), Positives = 182/222 (81%), Gaps = 14/222 (6%)
 Frame = +2

Query: 83  RQSTLDSFIQRNNHC---QVVGNEESNNLGC---------YCAIDLEAAKTWIYPVN--I 220
           RQSTLD FI R  H    QVV     +   C            ID EAAKTWIYPVN  +
Sbjct: 64  RQSTLDKFIGRTEHRPENQVVSQSNFDEFECGGNDDDKSPLVGIDPEAAKTWIYPVNGSV 123

Query: 221 PLRDYQLSITKTALFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQ 400
           PLRDYQ +ITKTALF+NTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLV+Q
Sbjct: 124 PLRDYQFAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVMQ 183

Query: 401 QIEACHNTVGIPQEWAIDLTGQTNPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLV 580
           QIEACHN VGIPQEW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LV
Sbjct: 184 QIEACHNIVGIPQEWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLV 243

Query: 581 CLVIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSK 706
           CLVIDEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK
Sbjct: 244 CLVIDEAHRALGNYSYCVVVRELMAVPVQLRILALTATPGSK 285


>ref|XP_002526811.1| protein with unknown function [Ricinus communis]
           gi|223533815|gb|EEF35546.1| protein with unknown
           function [Ricinus communis]
          Length = 1351

 Score =  331 bits (848), Expect = 1e-88
 Identities = 166/214 (77%), Positives = 184/214 (85%), Gaps = 5/214 (2%)
 Frame = +2

Query: 83  RQSTLDSFIQRNNHCQVV-GN----EESNNLGCYCAIDLEAAKTWIYPVNIPLRDYQLSI 247
           +QSTL+ FI +        GN    ++ N + C   ID EAAKTWIYPVN+P+RDYQL+I
Sbjct: 61  KQSTLERFIGKTVRPDPPPGNPTVIDDENGVSCI-EIDAEAAKTWIYPVNVPVRDYQLAI 119

Query: 248 TKTALFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEACHNTV 427
           TKTALF+NTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQIEACHN V
Sbjct: 120 TKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPDGKIVFAAPSRPLVMQQIEACHNIV 179

Query: 428 GIPQEWAIDLTGQTNPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCLVIDEAHR 607
           GIPQEW ID+TGQ +P+KRA  WK KR+FFVTPQVLEKDIQ+GTCLVKHLVCLVIDEAHR
Sbjct: 180 GIPQEWTIDMTGQLSPAKRACFWKTKRMFFVTPQVLEKDIQAGTCLVKHLVCLVIDEAHR 239

Query: 608 ASGNYSYCVAVRELMAVPLQFRILALTATPGSKQ 709
           A GNYSYCVAV ELMAVP+Q RILALTATPGSKQ
Sbjct: 240 ALGNYSYCVAVCELMAVPIQLRILALTATPGSKQ 273