BLASTX nr result
ID: Coptis25_contig00028466
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00028466
(773 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003529818.1| PREDICTED: uncharacterized protein LOC100794... 98 4e-28
ref|XP_003533060.1| PREDICTED: uncharacterized protein LOC100795... 101 6e-28
emb|CAN64395.1| hypothetical protein VITISV_036654 [Vitis vinifera] 115 2e-25
ref|XP_002280900.1| PREDICTED: uncharacterized protein LOC100248... 112 2e-24
ref|XP_002517549.1| conserved hypothetical protein [Ricinus comm... 110 2e-24
>ref|XP_003529818.1| PREDICTED: uncharacterized protein LOC100794859 [Glycine max]
Length = 1053
Score = 97.8 bits (242), Expect(4) = 4e-28
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Frame = -2
Query: 454 EHLLVNVSAYLNLTGRVQYN---VFLEGIYDTLIGEMYLTGCHDMDASEKEMNGSLGLEG 284
+ LL+NVSA L+LTG+ N +FLEG+YD +G++YL GC D+ A K + S LE
Sbjct: 601 KQLLINVSAQLSLTGKGYSNFSVLFLEGLYDPHVGKLYLIGCRDVRAPWKVLYQSYDLEA 660
Query: 283 GQDCMILVNIDYSASTSRWLINPTAKISISSQRNANDPLHFSLISVHS-PLIF 128
G DC+I V + Y +T+RWL++P A ISI SQR +D L F I + + P+I+
Sbjct: 661 GMDCLIQVVVAYPPTTTRWLVDPRATISIESQRTDDDALRFDPIKLKTFPIIY 713
Score = 39.3 bits (90), Expect(4) = 4e-28
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -3
Query: 114 DFIFRRAFEKILQILMLLVVIGSIYSQLVYLRENIDAL 1
D + RR E IL+IL L IG I SQL Y+++N+D+L
Sbjct: 719 DVLSRRGVEGILRILTLSFAIGCILSQLFYIQQNVDSL 756
Score = 28.1 bits (61), Expect(4) = 4e-28
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 651 SLSRLSDELSVHLSVIMDPFTNTKSPK 571
SLS LS++L+ H+S DP N +PK
Sbjct: 533 SLSVLSEDLTFHVSGFPDPVPNVLAPK 559
Score = 25.8 bits (55), Expect(4) = 4e-28
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 593 LPTLSRPRTFIRMTILSFRPLFGQ 522
+P + P+ I+M ILS PLFG+
Sbjct: 552 VPNVLAPKVDIQMEILSIGPLFGR 575
>ref|XP_003533060.1| PREDICTED: uncharacterized protein LOC100795773 [Glycine max]
Length = 1055
Score = 101 bits (252), Expect(4) = 6e-28
Identities = 54/112 (48%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Frame = -2
Query: 454 EHLLVNVSAYLNLTGR-VQYNV-FLEGIYDTLIGEMYLTGCHDMDASEKEMNGSLGLEGG 281
+ LL+NVSA L+LTG+ ++V FLEG+YD +G++YL GC D+ AS K + S LE G
Sbjct: 603 KQLLINVSAQLSLTGKGYSFSVLFLEGLYDPHVGKLYLIGCRDVRASWKVLYQSYDLEAG 662
Query: 280 QDCMILVNIDYSASTSRWLINPTAKISISSQRNANDPLHFSLISVHS-PLIF 128
DC+I V + Y +T+RWL++P A ISI SQR +DPL F I + + P+I+
Sbjct: 663 MDCLIQVVVAYPPTTTRWLVDPRASISIESQRTDDDPLRFDPIKLKTFPIIY 714
Score = 38.9 bits (89), Expect(4) = 6e-28
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -3
Query: 114 DFIFRRAFEKILQILMLLVVIGSIYSQLVYLRENIDAL 1
D + RR E IL+IL L IG I SQL Y+++N+D+L
Sbjct: 720 DVLSRRGVEGILRILTLSFAIGCILSQLFYIQKNVDSL 757
Score = 26.9 bits (58), Expect(4) = 6e-28
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 651 SLSRLSDELSVHLSVIMDPFTNTKSPK 571
SLS LS++L+ H+S DP N +P+
Sbjct: 535 SLSVLSEDLTFHVSGFPDPVPNVLAPR 561
Score = 23.1 bits (48), Expect(4) = 6e-28
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 593 LPTLSRPRTFIRMTILSFRPLFG 525
+P + PR I+M ILS LFG
Sbjct: 554 VPNVLAPRIDIQMEILSIGSLFG 576
>emb|CAN64395.1| hypothetical protein VITISV_036654 [Vitis vinifera]
Length = 1037
Score = 115 bits (287), Expect(2) = 2e-25
Identities = 64/138 (46%), Positives = 87/138 (63%), Gaps = 5/138 (3%)
Frame = -2
Query: 511 WKFMSRLKEAHP-DAKVKFSE-HLLVNVSAYLNLTGRVQYN---VFLEGIYDTLIGEMYL 347
W S ++E P K +++E LL+NVSA L LTG+ N VF+EG+YD +G+MYL
Sbjct: 564 WSNGSTVEEDTPYHTKAEYTEKQLLLNVSAQLMLTGKAYKNFSVVFVEGLYDPHVGKMYL 623
Query: 346 TGCHDMDASEKEMNGSLGLEGGQDCMILVNIDYSASTSRWLINPTAKISISSQRNANDPL 167
GC D AS K + S+ LE G DC+I V + Y +T++WL NP A+ISI+S RN +DPL
Sbjct: 624 VGCRDFRASWKTLFESMDLEAGLDCLIEVIVSYPPTTAQWLTNPIARISITSARNEDDPL 683
Query: 166 HFSLISVHSPLIFVQNMR 113
HFS I H+ I + R
Sbjct: 684 HFSTIKFHTLPIMYRRQR 701
Score = 26.9 bits (58), Expect(2) = 2e-25
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 654 LSLSRLSDELSVHLSVIMDPFTNTKSPK 571
+SLS LS++L++H+S I DP + P+
Sbjct: 519 VSLSILSEDLTLHVSAIPDPPPRSPVPR 546
>ref|XP_002280900.1| PREDICTED: uncharacterized protein LOC100248030 [Vitis vinifera]
Length = 1059
Score = 112 bits (279), Expect(2) = 2e-24
Identities = 63/138 (45%), Positives = 86/138 (62%), Gaps = 5/138 (3%)
Frame = -2
Query: 511 WKFMSRLKEAHP-DAKVKFSE-HLLVNVSAYLNLTGRVQYN---VFLEGIYDTLIGEMYL 347
W S ++E P K +++E LL+NVSA L LTG+ N VF+EG+YD +G+MYL
Sbjct: 586 WSNGSTVEEDTPYHTKAEYTEKQLLLNVSAQLMLTGKAYKNFSVVFVEGLYDPHVGKMYL 645
Query: 346 TGCHDMDASEKEMNGSLGLEGGQDCMILVNIDYSASTSRWLINPTAKISISSQRNANDPL 167
GC D AS K + S+ LE G DC+I V + Y +T++WL NP A+ISI+S RN +DPL
Sbjct: 646 VGCRDFRASWKTLFESMDLEAGLDCLIEVIVSYPPTTAQWLTNPIARISITSARNEDDPL 705
Query: 166 HFSLISVHSPLIFVQNMR 113
HFS I + I + R
Sbjct: 706 HFSTIKFQTLPIMYRRQR 723
Score = 26.9 bits (58), Expect(2) = 2e-24
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 654 LSLSRLSDELSVHLSVIMDPFTNTKSPK 571
+SLS LS++L++H+S I DP + P+
Sbjct: 541 VSLSILSEDLTLHVSAIPDPPPRSPVPR 568
>ref|XP_002517549.1| conserved hypothetical protein [Ricinus communis]
gi|223543181|gb|EEF44713.1| conserved hypothetical
protein [Ricinus communis]
Length = 876
Score = 110 bits (274), Expect(3) = 2e-24
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Frame = -2
Query: 490 KEAHPDAKVKFSE-HLLVNVSAYLNLTGRVQYN---VFLEGIYDTLIGEMYLTGCHDMDA 323
KE +K +++E +L+NVSA + L G N +FLEG+YD +G+MYL GC D+ A
Sbjct: 409 KETPYHSKAEYTEKEVLLNVSAQITLYGDSSTNFSVLFLEGLYDPHVGKMYLVGCRDVRA 468
Query: 322 SEKEMNGSLGLEGGQDCMILVNIDYSASTSRWLINPTAKISISSQRNANDPLHFSLISVH 143
S + S+ LE G DC+I V + Y +TSRWL+NPT +ISI+SQRN +DPLHF+ I +
Sbjct: 469 SWNILFESMDLEAGLDCLIEVIVSYPPTTSRWLVNPTVRISITSQRNDDDPLHFNTIRLQ 528
Query: 142 SPLIFVQNMR 113
+ I + R
Sbjct: 529 TLPIMYRKQR 538
Score = 25.0 bits (53), Expect(3) = 2e-24
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 657 ILSLSRLSDELSVHLSVIMDPFTNTK 580
I SLS L+++L++H S DP +++
Sbjct: 353 ITSLSLLAEDLTLHTSAFPDPLPSSR 378
Score = 23.5 bits (49), Expect(3) = 2e-24
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 593 LPTLSRPRTFIRMTILSFRPLFGQ 522
LP+ RT M ILS PLFG+
Sbjct: 374 LPSSRPARTDFGMEILSLGPLFGR 397