BLASTX nr result

ID: Coptis25_contig00028465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028465
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    65   7e-09
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo...    65   7e-09
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    65   7e-09
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...    62   6e-08
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    62   6e-08

>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   WQFTKKGNFSTKSAYHVAASFK----AISPQASTSSFNPKLYLQIWQLKIPYRVQNFIWK 168
           WQ+ + G FS KSAYH    +K    +   QAST+S   +L+ ++W LK+P +++ F W+
Sbjct: 467 WQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTAS-RSRLWKRLWNLKVPAKIKIFGWR 525

Query: 169 TSHNILRTCEVLIKHHLNIDSMCCQYCDNTSEDLYHL 279
               ++    +L   H+  DS  C  C N  ED+ H+
Sbjct: 526 ALKGLVPCRAILANRHVG-DSGGCPVCQNGPEDIKHM 561


>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
          Length = 1395

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   WQFTKKGNFSTKSAYHVAASFK----AISPQASTSSFNPKLYLQIWQLKIPYRVQNFIWK 168
           WQ+ + G FS KSAYH    +K    +   QAST+S   +L+ ++W LK+P +++ F W+
Sbjct: 497 WQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTAS-RSRLWKRLWNLKVPAKIKIFGWR 555

Query: 169 TSHNILRTCEVLIKHHLNIDSMCCQYCDNTSEDLYHL 279
               ++    +L   H+  DS  C  C N  ED+ H+
Sbjct: 556 ALKGLVPCRAILANRHVG-DSGGCPVCQNGPEDIKHM 591


>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   WQFTKKGNFSTKSAYHVAASFK----AISPQASTSSFNPKLYLQIWQLKIPYRVQNFIWK 168
           WQ+ + G FS KSAYH    +K    +   QAST+S   +L+ ++W LK+P +++ F W+
Sbjct: 648 WQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTAS-RSRLWKRLWNLKVPAKIKIFGWR 706

Query: 169 TSHNILRTCEVLIKHHLNIDSMCCQYCDNTSEDLYHL 279
               ++    +L   H+  DS  C  C N  ED+ H+
Sbjct: 707 ALKGLVPCRAILANRHVG-DSGGCPVCQNGPEDIKHM 742


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
 Frame = +1

Query: 1   WQFTKKGNFSTKSAYHVAASF-----KAISPQASTSSFNPKLYLQ-IWQLKIPYRVQNFI 162
           W + +KG FS KSAY V         K  S   S  S   ++Y + +W++++P +V++FI
Sbjct: 241 WHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFI 300

Query: 163 WKTSHNILRTCEVLIKHHLNIDSMCCQYCDNTSEDLYHLF 282
           W+ SHNIL     L +  +++DS C   C+  +ED  HLF
Sbjct: 301 WRFSHNILALRVNLQQRGMDLDSRCI-ICNRMNEDAGHLF 339


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
 Frame = +1

Query: 1    WQFTKKGNFSTKSAYHVAASF-----KAISPQASTSSFNPKLYLQ-IWQLKIPYRVQNFI 162
            W + +KG FS KSAY V         K  S   S  S   ++Y + +W++++P +V++FI
Sbjct: 1134 WHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFI 1193

Query: 163  WKTSHNILRTCEVLIKHHLNIDSMCCQYCDNTSEDLYHLF 282
            W+ SHNIL     L +  +++DS C   C+  +ED  HLF
Sbjct: 1194 WRFSHNILALRVNLQQRGMDLDSRCI-ICNRMNEDAGHLF 1232


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