BLASTX nr result

ID: Coptis25_contig00028460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028460
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [...   197   8e-49
emb|CAN79713.1| hypothetical protein VITISV_027502 [Vitis vinifera]   196   2e-48
ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|2...   194   9e-48
emb|CAB56195.1| Knolle [Capsicum annuum]                              192   3e-47
ref|XP_003611259.1| Knolle [Medicago truncatula] gi|355512594|gb...   191   6e-47

>ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [Vitis vinifera]
          Length = 311

 Score =  197 bits (502), Expect = 8e-49
 Identities = 104/140 (74%), Positives = 113/140 (80%)
 Frame = -2

Query: 580 VTGERLEEDVIEKIITNGEEGGEDFLQRAIQEHGRGKVLETVVEIKDRHDTAKEIERSLL 401
           VTGE  +E+VIEKII+NGE GGE+FL RAIQEHGRGKVLETVVEI+DRHD AKEIE+SLL
Sbjct: 173 VTGEYPDEEVIEKIISNGE-GGEEFLGRAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLL 231

Query: 400 ELHQVFLDMAVMVEAQGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXX 221
           ELHQVFLDMA+MVEAQGEQMDDIEHHV +AA YVKDGTKNLKTAKD+QRSSRK MC    
Sbjct: 232 ELHQVFLDMAIMVEAQGEQMDDIEHHVMNAAQYVKDGTKNLKTAKDYQRSSRKCMCLGVI 291

Query: 220 XXXXXXXXXXXXXITSFSKS 161
                         TSFS S
Sbjct: 292 LLLILILIVVIPIATSFSNS 311


>emb|CAN79713.1| hypothetical protein VITISV_027502 [Vitis vinifera]
          Length = 298

 Score =  196 bits (498), Expect = 2e-48
 Identities = 103/140 (73%), Positives = 112/140 (80%)
 Frame = -2

Query: 580 VTGERLEEDVIEKIITNGEEGGEDFLQRAIQEHGRGKVLETVVEIKDRHDTAKEIERSLL 401
           VTGE  +E+VIEKII+NGE GGE+FL RAIQEHGRGKVLETVVEI+DRHD AKEIE+SLL
Sbjct: 160 VTGEYPDEEVIEKIISNGE-GGEEFLGRAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLL 218

Query: 400 ELHQVFLDMAVMVEAQGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXX 221
           ELHQVFLDMA+MVEAQGEQMDDIEHHV +AA YVKDGTKNLKTAKD+QR SRK MC    
Sbjct: 219 ELHQVFLDMAIMVEAQGEQMDDIEHHVMNAAQYVKDGTKNLKTAKDYQRGSRKCMCLGVI 278

Query: 220 XXXXXXXXXXXXXITSFSKS 161
                         TSFS S
Sbjct: 279 LLLILILIVVIPIATSFSNS 298


>ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|222862697|gb|EEF00204.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  194 bits (493), Expect = 9e-48
 Identities = 99/140 (70%), Positives = 115/140 (82%)
 Frame = -2

Query: 580 VTGERLEEDVIEKIITNGEEGGEDFLQRAIQEHGRGKVLETVVEIKDRHDTAKEIERSLL 401
           VTGE  +E+VI+KII++G  GGE+FL+RAIQEHG+GKVLETVVEI+DR+D AKEIE+SLL
Sbjct: 175 VTGEYPDEEVIDKIISDGN-GGEEFLKRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLL 233

Query: 400 ELHQVFLDMAVMVEAQGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXX 221
           ELHQVFLDMAVMVEAQGEQMDDIEHHV +A+HYVKDGTK LK+AKDHQ+SSRKWMC    
Sbjct: 234 ELHQVFLDMAVMVEAQGEQMDDIEHHVLNASHYVKDGTKELKSAKDHQKSSRKWMCIGII 293

Query: 220 XXXXXXXXXXXXXITSFSKS 161
                        +TSFS S
Sbjct: 294 LLLIIILVIVIPIVTSFSYS 313


>emb|CAB56195.1| Knolle [Capsicum annuum]
          Length = 311

 Score =  192 bits (488), Expect = 3e-47
 Identities = 97/141 (68%), Positives = 114/141 (80%), Gaps = 1/141 (0%)
 Frame = -2

Query: 580 VTGERLEEDVIEKIITNGE-EGGEDFLQRAIQEHGRGKVLETVVEIKDRHDTAKEIERSL 404
           VTGE+ +E+VI+KII++G  +GGE+FL RAIQEHGRGKVLETVVEI+DRHD AKEIE+SL
Sbjct: 171 VTGEQPDEEVIDKIISSGNGQGGEEFLSRAIQEHGRGKVLETVVEIQDRHDAAKEIEKSL 230

Query: 403 LELHQVFLDMAVMVEAQGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXX 224
           LELHQ+FLDMAVMVEAQGE+MDDIEHHV +AA YV DGTKNLKTAK++Q+SSR WMC   
Sbjct: 231 LELHQIFLDMAVMVEAQGEKMDDIEHHVVNAAQYVNDGTKNLKTAKEYQKSSRTWMCIGI 290

Query: 223 XXXXXXXXXXXXXXITSFSKS 161
                          TSF+KS
Sbjct: 291 IILLILILVVIIPIATSFTKS 311


>ref|XP_003611259.1| Knolle [Medicago truncatula] gi|355512594|gb|AES94217.1| Knolle
           [Medicago truncatula]
          Length = 320

 Score =  191 bits (486), Expect = 6e-47
 Identities = 97/140 (69%), Positives = 111/140 (79%)
 Frame = -2

Query: 580 VTGERLEEDVIEKIITNGEEGGEDFLQRAIQEHGRGKVLETVVEIKDRHDTAKEIERSLL 401
           VTGE  +E+VIEKII+NG++  E FL +AIQEHGRGKVLETVVEI+DRHD AKEIE+SLL
Sbjct: 183 VTGEHADEEVIEKIISNGDD--ESFLGKAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLL 240

Query: 400 ELHQVFLDMAVMVEAQGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXX 221
           ELHQ+FLDMAVMVEAQGE+MDDIEHHV HA+HYVKDGTKNL  AK +Q+SSRKWMC    
Sbjct: 241 ELHQIFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDGTKNLHGAKQYQKSSRKWMCIGII 300

Query: 220 XXXXXXXXXXXXXITSFSKS 161
                        +TSFS S
Sbjct: 301 LLLILVLIIVIPIVTSFSSS 320


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