BLASTX nr result

ID: Coptis25_contig00028456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028456
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY74346.1| blight resistance protein RGA2 [Capsicum annuum]        99   5e-19
ref|XP_002532127.1| leucine-rich repeat containing protein, puta...    99   5e-19
gb|AFD18787.1| putative resistance protein, partial [Solanum bul...    98   8e-19
gb|AFD18786.1| putative resistance protein, partial [Solanum bul...    98   8e-19
gb|ACI16480.1| NBS-LRR resistance protein [Solanum bulbocastanum]      98   8e-19

>gb|ACY74346.1| blight resistance protein RGA2 [Capsicum annuum]
          Length = 957

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = -3

Query: 251 EDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDECWSLFRGRAF 72
           EDQ KWD +R +L  GA G+SVL TTRL+ V  ++GT+    L+ LSED CWSLFR RAF
Sbjct: 265 EDQQKWDNLRAALNVGANGASVLTTTRLEMVGSIMGTLRPCKLSNLSEDHCWSLFRQRAF 324

Query: 71  GREDEESNASLVEIGKQIVKKCG 3
           G + EE + SL  IGK+IVKKCG
Sbjct: 325 GNQ-EEISPSLEAIGKKIVKKCG 346


>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223528186|gb|EEF30247.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1142

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/82 (56%), Positives = 64/82 (78%)
 Frame = -3

Query: 248 DQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDECWSLFRGRAFG 69
           DQDKWD+++  L CG+KGSS++VTTR++ VA V+GT+P +NL+ LSE +CW LF+ RAF 
Sbjct: 258 DQDKWDRLKFVLACGSKGSSIIVTTRMEKVASVMGTLPAHNLSGLSEADCWLLFKERAFE 317

Query: 68  REDEESNASLVEIGKQIVKKCG 3
              EE + S++ IG +IVKKCG
Sbjct: 318 CRREE-HPSIICIGHEIVKKCG 338


>gb|AFD18787.1| putative resistance protein, partial [Solanum bulbocastanum]
          Length = 208

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = -3

Query: 251 EDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDECWSLFRGRAF 72
           EDQDKW K+R  L  GA G+SVL TTRL+ V  ++GT+  Y L+ LS+++CW LF  RAF
Sbjct: 80  EDQDKWAKLRQVLKVGASGASVLTTTRLEKVGSIMGTLQPYELSNLSQEDCWLLFMQRAF 139

Query: 71  GREDEESNASLVEIGKQIVKKCG 3
           G + EE N +LV IGK+IVKKCG
Sbjct: 140 GHQ-EEINLNLVAIGKEIVKKCG 161


>gb|AFD18786.1| putative resistance protein, partial [Solanum bulbocastanum]
          Length = 209

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = -3

Query: 251 EDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDECWSLFRGRAF 72
           EDQDKW K+R  L  GA G+SVL TTRL+ V  ++GT+  Y L+ LS+++CW LF  RAF
Sbjct: 80  EDQDKWAKLRQVLKVGASGASVLTTTRLEKVGSIMGTLQPYELSNLSQEDCWLLFMQRAF 139

Query: 71  GREDEESNASLVEIGKQIVKKCG 3
           G + EE N +LV IGK+IVKKCG
Sbjct: 140 GHQ-EEINLNLVAIGKEIVKKCG 161


>gb|ACI16480.1| NBS-LRR resistance protein [Solanum bulbocastanum]
          Length = 988

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = -3

Query: 251 EDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDECWSLFRGRAF 72
           EDQDKW K+R  L  GA G+SVL TTRL+ V  ++GT+  Y L+ LS+++CW LF  RAF
Sbjct: 267 EDQDKWAKLRQVLKVGASGASVLTTTRLEKVGSIMGTLQPYELSNLSQEDCWLLFMQRAF 326

Query: 71  GREDEESNASLVEIGKQIVKKCG 3
           G + EE N +LV IGK+IVKKCG
Sbjct: 327 GHQ-EEINLNLVAIGKEIVKKCG 348


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