BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028452
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...    73   3e-11
ref|XP_002520025.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...    66   3e-09
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]     66   3e-09
gb|AFG58154.1| Pinus taeda anonymous locus 0_15524_02 genomic se...    60   1e-07

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +1

Query: 1   VLSMNCHSFAKTVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 129
           VLSMNC SFA+T+SER+WLRNS +IWE VKNSP+ +EY +TLQ
Sbjct: 370 VLSMNCPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQ 412


>ref|XP_002520025.1| conserved hypothetical protein [Ricinus communis]
           gi|223540789|gb|EEF42349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   VLSMNCHSFAKTVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 129
           VLSMNC SFA+TVSER+WL+NS +IWE VKNS + +EY RTLQ
Sbjct: 289 VLSMNCPSFARTVSERDWLKNSAKIWELVKNSSIIAEYSRTLQ 331


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLSMNCHSFAKTVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 129
           VLSMN  SF +TVSER+WL+NS +IWESVK+SP+  EY RTLQ
Sbjct: 362 VLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQ 404


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLSMNCHSFAKTVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 129
           VLSMN  SF +TVSER+WL+NS +IWESVK+SP+  EY RTLQ
Sbjct: 363 VLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQ 405


>gb|AFG58154.1| Pinus taeda anonymous locus 0_15524_02 genomic sequence
           gi|383152191|gb|AFG58155.1| Pinus taeda anonymous locus
           0_15524_02 genomic sequence
          Length = 74

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +1

Query: 1   VLSMNCHSFAKTVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 129
           VLSM   SFA+ +SER+WLRN+ RIW+ VK SPV +EY +TLQ
Sbjct: 25  VLSMPRRSFARPISERDWLRNAARIWDMVKRSPVIAEYSKTLQ 67