BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028448
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...   130   2e-28
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]   128   7e-28
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...   104   1e-20
ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...    88   1e-15

>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score =  130 bits (326), Expect = 2e-28
 Identities = 83/194 (42%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
 Frame = -3

Query: 602  SSSVGELFFQRSPSQRPLTLFGDVNLHLFDDTMNLLKSDMAALEDGLVRPIGISEETHNS 423
            +S   EL  QRS +     +  D++LHL  D  N L  D   LE  L++     EE  N 
Sbjct: 763  NSQQTELLLQRS-TDNCHEMCSDIHLHLPADLKNELDVDFTVLEKDLIKTAPKLEEVANV 821

Query: 422  FTCM---MGASVLSSFTADPDCRLPHGTLISIHGNIVDVHSFDCDSLDFKTNSSYKGTGD 252
              C+   M AS+ S  T D    LP G L+S+ G ++ VH+ +  SLD   +SS +  GD
Sbjct: 822  PLCIETAMTASMQSFQTDDSAFLLPEGNLVSLQGQVLAVHNLNHTSLD--AHSSNENYGD 879

Query: 251  IQPTRLSQRLPSSICVHVSKGHQIVKLRGTLSKHVYPIGMGPGVSATFHRVLVI-GQHDL 75
            ++  RLS+ +  S C+HV   H IV + G LS+H YP G G GV ATFHR+L + GQ+ L
Sbjct: 880  VRQLRLSRGVTWSTCIHVLMDHHIVSIFGGLSEHAYPTGFGSGVVATFHRILELGGQNRL 939

Query: 74   MLTPVSFIVINSIK 33
            MLTPVSFI INS+K
Sbjct: 940  MLTPVSFIAINSMK 953


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score =  128 bits (322), Expect = 7e-28
 Identities = 82/194 (42%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
 Frame = -3

Query: 602  SSSVGELFFQRSPSQRPLTLFGDVNLHLFDDTMNLLKSDMAALEDGLVRPIGISEETHNS 423
            +S   EL  QRS +     +  D++LHL  D  N L+ D   LE  L++     EE  N 
Sbjct: 1023 NSQQTELLLQRS-TDNCHEMCSDIHLHLPADLKNELEVDFTVLEKDLIKTAPKLEEVANV 1081

Query: 422  FTCM---MGASVLSSFTADPDCRLPHGTLISIHGNIVDVHSFDCDSLDFKTNSSYKGTGD 252
              C+   M AS+ S  T D    LP G L+S+ G ++ VH+ +  SLD   + S +  GD
Sbjct: 1082 PLCIETAMTASMQSFQTDDSAFLLPEGNLVSLQGQVLAVHNLNHTSLD--AHLSNENYGD 1139

Query: 251  IQPTRLSQRLPSSICVHVSKGHQIVKLRGTLSKHVYPIGMGPGVSATFHRVLVI-GQHDL 75
            ++  RLS+ +  S C+HV   H IV + G LS+H YP G G GV ATFHR+L + GQ+ L
Sbjct: 1140 VRQLRLSRGVTWSTCIHVLMDHHIVSIFGGLSEHAYPTGFGXGVVATFHRILELGGQNRL 1199

Query: 74   MLTPVSFIVINSIK 33
            MLTPVSFI INS+K
Sbjct: 1200 MLTPVSFIAINSMK 1213


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
            gi|223550977|gb|EEF52463.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1159

 Score =  104 bits (260), Expect = 1e-20
 Identities = 68/169 (40%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
 Frame = -3

Query: 536  DVNLHLFDDTMNLLKSDMAALEDGLVRPIGISEETHNSFTCMMGASVLSSFTADPDCRLP 357
            DV L+L  + M      + A +     P    EET N     + +S LS  + D     P
Sbjct: 741  DVFLYLAVNAMWFFDIKLNARKGADTDPPTAPEETSNY---SISSSSLSYGSLDYTV-FP 796

Query: 356  HGTLISIHGNIVDVHSFDCDSLDFKTNSSYKGTGDIQPTRLSQRLPSSICVHVSKGHQIV 177
             G L S+HG++V +H FD +S D     S    GD+   R SQ   S  C+HV   +Q+V
Sbjct: 797  EGNLTSVHGDVVAIHGFDDNSADISL--SCNRLGDVLDMRFSQGKTSGSCIHVLVDNQVV 854

Query: 176  KLRGTLSKHVYPIGMGPGVSATFHRVLVI-GQHDLMLTPVSFIVINSIK 33
             + G+LSK+  P+G GP V+ATFHR+L   G + LMLTPVSFIV+NSI+
Sbjct: 855  TIFGSLSKYALPVGFGPDVNATFHRILKFRGTNKLMLTPVSFIVLNSIR 903


>ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|222844173|gb|EEE81720.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
 Frame = -3

Query: 587 ELFFQRSPSQRPLTLFGDVNLHLFDDTMNLLKSDMAALEDGLVRPIGISEETHNS---FT 417
           EL  +RS    P     DV LHL  D M+LL   +  +++G + P+ + EE  N    F 
Sbjct: 329 ELLLRRSTGNSPEC--SDVQLHLSADVMHLLVLKLNKMKEGFM-PVVMPEEAFNGSPHFM 385

Query: 416 CMMGASVLSSFTADPDCRLPHGTLISIHGNIVDVHSFDCDSLDFKTNSSYKGTGDIQPTR 237
             M AS     +++  C  P G LIS+ GN+V  H  + +  +    SS +   DI    
Sbjct: 386 TKMSASSTPFASSNSCCVFPEGNLISVLGNVVAFHFLNSNLAN--AQSSCETVSDIPHMG 443

Query: 236 LSQRLPSSICVHVSKGHQIVKLRGTLSKHVYPIGMGPGVSATFHRVL 96
             Q +PSS CVHV    Q+V++ G+LSKH Y +G G GV+ATFHRVL
Sbjct: 444 CFQGIPSSCCVHVLVDKQMVRIFGSLSKHAYAVGFGAGVNATFHRVL 490


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 61/181 (33%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
 Frame = -3

Query: 536  DVNLHLFDDTMNLLKSDMAALEDGLVRPIGISEETHNS-FTCMMGASVLSSFTADPDCRL 360
            D+ LHL  +  + L  D+   E+   + +   EE     +   + + + +S     DC  
Sbjct: 972  DIYLHLPANAKDSLVFDLEKQEENSTKLVIKPEEAGKPCYRDGISSDMQTSGFHGTDCLF 1031

Query: 359  PHGTLISIHGNIVDVHSFDCDSLDFKTN-SSYKGTGDIQPTRLSQRLPSSICVHVSKGHQ 183
            P G L S+ G++V VH      +D      S KG     P         S C+H+    Q
Sbjct: 1032 PEGNLSSVKGHVVAVHDLHQSCIDSNLECQSIKGGLCRFPVG-----GKSTCIHLLMEDQ 1086

Query: 182  IVKLRGTLSKHVYPIGMGPGVSATFHRVLVIGQ-HDLMLTPVSFIVINSIKEVYREYSDS 6
            IVK+ G L  H  P+G GPGVSATFHRVL +G    LMLTP+SFI INS   +   +++ 
Sbjct: 1087 IVKIFGYLKNHALPVGFGPGVSATFHRVLELGDLRRLMLTPLSFIDINSFSVLDHSFTEK 1146

Query: 5    F 3
            +
Sbjct: 1147 Y 1147