BLASTX nr result
ID: Coptis25_contig00028446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00028446
(616 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259... 94 8e-39
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223... 94 9e-38
ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805... 94 3e-36
ref|XP_003532977.1| PREDICTED: uncharacterized protein LOC100791... 94 3e-36
ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|2... 95 1e-35
>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
Length = 2197
Score = 93.6 bits (231), Expect(2) = 8e-39
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = +2
Query: 11 SVEELVLALKSHDLFLYFGHGNGTQFLPKDEIEKISSCAATLLMGCSSGSLPFVGCYNPH 190
+VEEL ALKSHDLF+Y GHG+G Q++P+ EI+K+ +CAATLLMGCSSGSL G Y P
Sbjct: 2005 TVEELAGALKSHDLFIYIGHGSGAQYIPRHEIQKLENCAATLLMGCSSGSLSLNGQYTPQ 2064
Query: 191 GIVLSY 208
G LSY
Sbjct: 2065 GTHLSY 2070
Score = 92.8 bits (229), Expect(2) = 8e-39
Identities = 55/104 (52%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 298 RFGKTVLSACLKERSTLSHECRT--LVDELESVSIGSSEVSATRIASKGTKLRNDNINSR 471
RFGK +L A L+ERS+ S C LV EL+S+SI + A + + KL +
Sbjct: 2092 RFGKAMLDAWLRERSSPSVACAQCRLVAELKSMSITGGKGDAKKKIPR-KKLSKACSSVV 2150
Query: 472 CKETTGRRSSIASFMSQAREACVFPFLIGASPVCYGVPTGIRKK 603
C++ R I SFMSQAREAC PFLIGASPVCYGVPTGIRKK
Sbjct: 2151 CEDYCNHRPKIGSFMSQAREACTLPFLIGASPVCYGVPTGIRKK 2194
>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
separase, putative [Ricinus communis]
Length = 2153
Score = 93.6 bits (231), Expect(2) = 9e-38
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = +2
Query: 11 SVEELVLALKSHDLFLYFGHGNGTQFLPKDEIEKISSCAATLLMGCSSGSLPFVGCYNPH 190
+ EEL ALK+HDLFLYFGHG+G Q++ + EI+K+ +CAATLLMGCSSG+L G Y PH
Sbjct: 1960 TAEELTSALKNHDLFLYFGHGSGAQYISQQEIQKLENCAATLLMGCSSGALSLNGSYIPH 2019
Query: 191 GIVLSY 208
G LSY
Sbjct: 2020 GTPLSY 2025
Score = 89.4 bits (220), Expect(2) = 9e-38
Identities = 52/108 (48%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Frame = +1
Query: 298 RFGKTVLSACLKERSTLSHEC---RTLVDELESVSIGSSEVSATRIASKGTKLRNDNINS 468
RFGK +L A LKERS S +C L +E E++++ +V+ + K + +
Sbjct: 2047 RFGKVMLDAWLKERSIASSDCIQCNLLAEEFEAMNLKDRKVATKKRVQKKKEPETCD-GD 2105
Query: 469 RCKETTGRRSSIASFMSQAREACVFPFLIGASPVCYGVPTGI-RKKDL 609
K + R I SFMSQAREAC P+LIGASPVCYGVPTGI RKKDL
Sbjct: 2106 ALKNSCNHRPKIGSFMSQAREACRLPYLIGASPVCYGVPTGIRRKKDL 2153
>ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805306 [Glycine max]
Length = 2185
Score = 94.0 bits (232), Expect(2) = 3e-36
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = +2
Query: 11 SVEELVLALKSHDLFLYFGHGNGTQFLPKDEIEKISSCAATLLMGCSSGSLPFVGCYNPH 190
+++EL AL+SHDLF+YFGHG+G Q++P+ EI+K+ CAATLLMGCSSGSL G Y P
Sbjct: 1977 TIKELASALESHDLFIYFGHGSGGQYIPRHEIQKLDKCAATLLMGCSSGSLTLPGQYAPQ 2036
Query: 191 GIVLSY 208
GI LSY
Sbjct: 2037 GIPLSY 2042
Score = 84.0 bits (206), Expect(2) = 3e-36
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 298 RFGKTVLSACLKERSTLSHEC---RTLVDELESVSIGSSEVSATRIASKGTKLRNDNINS 468
RFGK +L A LKERS + EC L +E E++++ + A R A + L + S
Sbjct: 2064 RFGKAMLDAWLKERSDMPTECLQCNLLSEEFEAMNLKGCKGRAKRKAPRKKLL--ELAES 2121
Query: 469 RCKETTGRRSSIASFMSQAREACVFPFLIGASPVCYGVPTGIRKKDL 609
+ G R I +FM QARE C PFL GASPVCYGVPTGI +K +
Sbjct: 2122 ESPKNCGHRRKIGAFMGQAREVCTLPFLTGASPVCYGVPTGIWRKGM 2168
>ref|XP_003532977.1| PREDICTED: uncharacterized protein LOC100791010 [Glycine max]
Length = 2142
Score = 94.0 bits (232), Expect(2) = 3e-36
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = +2
Query: 11 SVEELVLALKSHDLFLYFGHGNGTQFLPKDEIEKISSCAATLLMGCSSGSLPFVGCYNPH 190
+++EL AL+SHDLF+YFGHG+G Q++P+ EI+K+ CAATLLMGCSSGSL G Y P
Sbjct: 1950 TIKELASALESHDLFIYFGHGSGGQYIPRHEIQKLDKCAATLLMGCSSGSLTLPGQYAPQ 2009
Query: 191 GIVLSY 208
GI LSY
Sbjct: 2010 GIPLSY 2015
Score = 83.6 bits (205), Expect(2) = 3e-36
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 298 RFGKTVLSACLKERSTLSHEC---RTLVDELESVSIGSSEVSATRIASKGTKLRNDNINS 468
RFGK +L A LKERS + EC L +E E++++ + A R A + L + S
Sbjct: 2037 RFGKAMLDAWLKERSDMPTECLQCNLLSEEFEAMNLKGCKGRAKRKAPRKKLL--ELAES 2094
Query: 469 RCKETTGRRSSIASFMSQAREACVFPFLIGASPVCYGVPTGIRKK 603
+ G R I +FM QARE C PFL GASPVCYGVPTGI +K
Sbjct: 2095 ESPKNCGHRRKIGAFMGQAREVCTLPFLTGASPVCYGVPTGIWRK 2139
>ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|222840607|gb|EEE78154.1|
predicted protein [Populus trichocarpa]
Length = 713
Score = 94.7 bits (234), Expect(2) = 1e-35
Identities = 42/64 (65%), Positives = 51/64 (79%)
Frame = +2
Query: 17 EELVLALKSHDLFLYFGHGNGTQFLPKDEIEKISSCAATLLMGCSSGSLPFVGCYNPHGI 196
EEL ALK+HDLF+YFGHG+G Q++ + EI+K+ +CAATLLMGCSSGSL GCY P G
Sbjct: 522 EELSSALKNHDLFIYFGHGSGAQYISQQEIQKLENCAATLLMGCSSGSLSLNGCYAPQGT 581
Query: 197 VLSY 208
LSY
Sbjct: 582 ALSY 585
Score = 81.3 bits (199), Expect(2) = 1e-35
Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Frame = +1
Query: 298 RFGKTVLSACLKERSTLS---HECRTLVDELESVSIGSSEVSATRIASKGTKLRNDNINS 468
RFGK +L A LKERS++S +C + E E+++I + + A + K TK
Sbjct: 607 RFGKAMLDAWLKERSSVSLGCDQCNLVAKEFEAMNIKAGKGKAKKKVPK-TKAAGTFDGG 665
Query: 469 RCKETTGRRSSIASFMSQAREACVFPFLIGASPVCYGVPTGIR-KKDL 609
+ R I +FM QAREAC PFLIGASPVCYG+PT I KKDL
Sbjct: 666 VVINSCDHRPKIGAFMGQAREACTLPFLIGASPVCYGIPTSIGIKKDL 713