BLASTX nr result
ID: Coptis25_contig00028434
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028434 (533 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C... 258 3e-67 ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C... 245 3e-63 ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C... 245 3e-63 ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C... 245 3e-63 ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2... 243 2e-62 >ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed protein product [Vitis vinifera] Length = 557 Score = 258 bits (660), Expect = 3e-67 Identities = 125/154 (81%), Positives = 141/154 (91%) Frame = +1 Query: 1 GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180 GDKKL+GTFLPVGD D+ NVKGISMLARDLQSIVLYD+EGKF GVRRP+SNLP+DI GT+ Sbjct: 404 GDKKLFGTFLPVGDSDSPNVKGISMLARDLQSIVLYDKEGKFAGVRRPNSNLPIDIDGTR 463 Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360 IVI DAIGSSGLDLK DPGVPIVYAGFGALMLTTCISYLSH+Q+WALQDGTTVVIGGKTN Sbjct: 464 IVIEDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHTQIWALQDGTTVVIGGKTN 523 Query: 361 RAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 462 RAK+EFP+EMN+LLD VPE++ SS + S+ + G Sbjct: 524 RAKLEFPDEMNQLLDRVPELVESSLSKQSDAISG 557 >ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Cucumis sativus] Length = 560 Score = 245 bits (625), Expect = 3e-63 Identities = 119/144 (82%), Positives = 131/144 (90%) Frame = +1 Query: 1 GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180 GDKKLYGTFLPVGD ++ +VKGISMLARDLQSIVLYDQEGKFVGVRRP S LP+DI G K Sbjct: 408 GDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIK 467 Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360 I IVDAIGS+GL+LK DPGVPIVYAGFGALMLTTC+SYLSHSQVWA+QDGT V++GGKTN Sbjct: 468 IEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTN 527 Query: 361 RAKIEFPNEMNRLLDLVPEIINSS 432 RAK+EFP EM+RLLD VPEII S Sbjct: 528 RAKVEFPEEMDRLLDKVPEIIEPS 551 >ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Cucumis sativus] Length = 557 Score = 245 bits (625), Expect = 3e-63 Identities = 119/144 (82%), Positives = 131/144 (90%) Frame = +1 Query: 1 GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180 GDKKLYGTFLPVGD ++ +VKGISMLARDLQSIVLYDQEGKFVGVRRP S LP+DI G K Sbjct: 405 GDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIK 464 Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360 I IVDAIGS+GL+LK DPGVPIVYAGFGALMLTTC+SYLSHSQVWA+QDGT V++GGKTN Sbjct: 465 IEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTN 524 Query: 361 RAKIEFPNEMNRLLDLVPEIINSS 432 RAK+EFP EM+RLLD VPEII S Sbjct: 525 RAKVEFPEEMDRLLDKVPEIIEPS 548 >ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Glycine max] Length = 563 Score = 245 bits (625), Expect = 3e-63 Identities = 117/154 (75%), Positives = 140/154 (90%) Frame = +1 Query: 1 GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180 GDKKL+GTFLPVGD ++ +VKGISMLARDLQSIVLYD+EGKF GVRRP+S LP++I G++ Sbjct: 410 GDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSE 469 Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360 IVIVDAIGSSGL+LK DPGVP+VYAGFGALM+TTCISYLSHSQ+WALQDGTTV +GGKTN Sbjct: 470 IVIVDAIGSSGLELKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTN 529 Query: 361 RAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 462 RAK+EFP EM+RLLD VPEI+ S+ P+ ++ + G Sbjct: 530 RAKMEFPEEMSRLLDKVPEIVESNLPKHADSISG 563 >ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1| predicted protein [Populus trichocarpa] Length = 432 Score = 243 bits (619), Expect = 2e-62 Identities = 118/154 (76%), Positives = 134/154 (87%) Frame = +1 Query: 1 GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180 GD KLYGTFLPVGD ++ NVKGISMLARDLQSIVLYDQEGKFVGVRRP+S LP+DI G K Sbjct: 279 GDNKLYGTFLPVGDVNSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGMK 338 Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360 I+I DAIGSSGL+LK DPGVP+VYAGFGALMLTTC+SYLSHSQ+WALQDGT V++GGKTN Sbjct: 339 IIIEDAIGSSGLELKTDPGVPVVYAGFGALMLTTCLSYLSHSQIWALQDGTAVIVGGKTN 398 Query: 361 RAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 462 RAK EF E+N LLD VPEI+ SS + S++ G Sbjct: 399 RAKAEFQYEINFLLDKVPEIVESSLSKQSDVASG 432