BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028434
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   258   3e-67
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C...   245   3e-63
ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C...   245   3e-63
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   245   3e-63
ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  258 bits (660), Expect = 3e-67
 Identities = 125/154 (81%), Positives = 141/154 (91%)
 Frame = +1

Query: 1   GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180
           GDKKL+GTFLPVGD D+ NVKGISMLARDLQSIVLYD+EGKF GVRRP+SNLP+DI GT+
Sbjct: 404 GDKKLFGTFLPVGDSDSPNVKGISMLARDLQSIVLYDKEGKFAGVRRPNSNLPIDIDGTR 463

Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360
           IVI DAIGSSGLDLK DPGVPIVYAGFGALMLTTCISYLSH+Q+WALQDGTTVVIGGKTN
Sbjct: 464 IVIEDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHTQIWALQDGTTVVIGGKTN 523

Query: 361 RAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 462
           RAK+EFP+EMN+LLD VPE++ SS  + S+ + G
Sbjct: 524 RAKLEFPDEMNQLLDRVPELVESSLSKQSDAISG 557


>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 560

 Score =  245 bits (625), Expect = 3e-63
 Identities = 119/144 (82%), Positives = 131/144 (90%)
 Frame = +1

Query: 1   GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180
           GDKKLYGTFLPVGD ++ +VKGISMLARDLQSIVLYDQEGKFVGVRRP S LP+DI G K
Sbjct: 408 GDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIK 467

Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360
           I IVDAIGS+GL+LK DPGVPIVYAGFGALMLTTC+SYLSHSQVWA+QDGT V++GGKTN
Sbjct: 468 IEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTN 527

Query: 361 RAKIEFPNEMNRLLDLVPEIINSS 432
           RAK+EFP EM+RLLD VPEII  S
Sbjct: 528 RAKVEFPEEMDRLLDKVPEIIEPS 551


>ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 557

 Score =  245 bits (625), Expect = 3e-63
 Identities = 119/144 (82%), Positives = 131/144 (90%)
 Frame = +1

Query: 1   GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180
           GDKKLYGTFLPVGD ++ +VKGISMLARDLQSIVLYDQEGKFVGVRRP S LP+DI G K
Sbjct: 405 GDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIK 464

Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360
           I IVDAIGS+GL+LK DPGVPIVYAGFGALMLTTC+SYLSHSQVWA+QDGT V++GGKTN
Sbjct: 465 IEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTN 524

Query: 361 RAKIEFPNEMNRLLDLVPEIINSS 432
           RAK+EFP EM+RLLD VPEII  S
Sbjct: 525 RAKVEFPEEMDRLLDKVPEIIEPS 548


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  245 bits (625), Expect = 3e-63
 Identities = 117/154 (75%), Positives = 140/154 (90%)
 Frame = +1

Query: 1   GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180
           GDKKL+GTFLPVGD ++ +VKGISMLARDLQSIVLYD+EGKF GVRRP+S LP++I G++
Sbjct: 410 GDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSE 469

Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360
           IVIVDAIGSSGL+LK DPGVP+VYAGFGALM+TTCISYLSHSQ+WALQDGTTV +GGKTN
Sbjct: 470 IVIVDAIGSSGLELKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTN 529

Query: 361 RAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 462
           RAK+EFP EM+RLLD VPEI+ S+ P+ ++ + G
Sbjct: 530 RAKMEFPEEMSRLLDKVPEIVESNLPKHADSISG 563


>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  243 bits (619), Expect = 2e-62
 Identities = 118/154 (76%), Positives = 134/154 (87%)
 Frame = +1

Query: 1   GDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTK 180
           GD KLYGTFLPVGD ++ NVKGISMLARDLQSIVLYDQEGKFVGVRRP+S LP+DI G K
Sbjct: 279 GDNKLYGTFLPVGDVNSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGMK 338

Query: 181 IVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTN 360
           I+I DAIGSSGL+LK DPGVP+VYAGFGALMLTTC+SYLSHSQ+WALQDGT V++GGKTN
Sbjct: 339 IIIEDAIGSSGLELKTDPGVPVVYAGFGALMLTTCLSYLSHSQIWALQDGTAVIVGGKTN 398

Query: 361 RAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 462
           RAK EF  E+N LLD VPEI+ SS  + S++  G
Sbjct: 399 RAKAEFQYEINFLLDKVPEIVESSLSKQSDVASG 432