BLASTX nr result

ID: Coptis25_contig00028427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028427
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144961.1| PREDICTED: BI1-like protein-like [Cucumis sa...    92   4e-17
ref|XP_002516809.1| Transmembrane BAX inhibitor motif-containing...    91   8e-17
ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003546118.1| PREDICTED: BI1-like protein-like [Glycine max]     89   3e-16
gb|ACU19337.1| unknown [Glycine max]                                   89   3e-16

>ref|XP_004144961.1| PREDICTED: BI1-like protein-like [Cucumis sativus]
           gi|449471847|ref|XP_004153426.1| PREDICTED: BI1-like
           protein-like [Cucumis sativus]
           gi|449523593|ref|XP_004168808.1| PREDICTED: BI1-like
           protein-like [Cucumis sativus]
          Length = 244

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/55 (78%), Positives = 50/55 (90%)
 Frame = -2

Query: 167 IYHQKHPVNFILLGLFTTCLSVTVGVTCANTDGKIVLEALILTSAVVASLTGYTF 3
           IY QKHP+N + LG+FT  LS+TVGV+CANTDG+IVLEALILTSAVV+SLTGYTF
Sbjct: 92  IYRQKHPLNLVFLGIFTATLSLTVGVSCANTDGRIVLEALILTSAVVSSLTGYTF 146



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/54 (70%), Positives = 49/54 (90%)
 Frame = -1

Query: 468 KVDLEAGGTTLFPGLSHAENDLRWGFIRKVYAILSAQILLTTLVSAITVLYTPL 307
           +VDLE+G  TL+PGLS+ EN LRWGFIRKVY IL+AQI+LTT+VS++TVLY+P+
Sbjct: 13  EVDLESG-ETLYPGLSYGENQLRWGFIRKVYGILAAQIVLTTIVSSVTVLYSPI 65


>ref|XP_002516809.1| Transmembrane BAX inhibitor motif-containing protein, putative
           [Ricinus communis] gi|223543897|gb|EEF45423.1|
           Transmembrane BAX inhibitor motif-containing protein,
           putative [Ricinus communis]
          Length = 210

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/55 (80%), Positives = 48/55 (87%)
 Frame = -2

Query: 167 IYHQKHPVNFILLGLFTTCLSVTVGVTCANTDGKIVLEALILTSAVVASLTGYTF 3
           +YHQKHPVN I+LGLFT  LS+ VGV+CA TDGKIVLEALILTSAVV SLT YTF
Sbjct: 94  VYHQKHPVNLIVLGLFTVSLSLLVGVSCAQTDGKIVLEALILTSAVVCSLTAYTF 148



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/54 (75%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = -1

Query: 468 KVDLEAG-GTTLFPGLSHAENDLRWGFIRKVYAILSAQILLTTLVSAITVLYTP 310
           +VDLEAG G TL+PGL   EN LRWG IRKVY ILSAQ+LLTT+VSA TVLYTP
Sbjct: 13  EVDLEAGNGETLYPGLGVGENQLRWGLIRKVYGILSAQLLLTTIVSAATVLYTP 66


>ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|222852549|gb|EEE90096.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = -2

Query: 167 IYHQKHPVNFILLGLFTTCLSVTVGVTCANTDGKIVLEALILTSAVVASLTGYTF 3
           +YHQKHPVN I+LGLFT  LS+ VG +CAN +GKIVLEALILTSAVV SLTGYTF
Sbjct: 100 VYHQKHPVNLIILGLFTVSLSLLVGASCANIEGKIVLEALILTSAVVCSLTGYTF 154



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 8/71 (11%)
 Frame = -1

Query: 495 EMYNTYSSV-------KVDLEAG-GTTLFPGLSHAENDLRWGFIRKVYAILSAQILLTTL 340
           EM+  YSSV       +VDLEAG G TL+PGLS  EN LRWG IRKVY IL+AQ++LTT+
Sbjct: 4   EMFG-YSSVSNKDAGKEVDLEAGNGETLYPGLSLGENQLRWGLIRKVYGILAAQLILTTI 62

Query: 339 VSAITVLYTPL 307
           V+A TVLYTP+
Sbjct: 63  VAAATVLYTPI 73


>ref|XP_003546118.1| PREDICTED: BI1-like protein-like [Glycine max]
          Length = 246

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/54 (81%), Positives = 47/54 (87%)
 Frame = -2

Query: 164 YHQKHPVNFILLGLFTTCLSVTVGVTCANTDGKIVLEALILTSAVVASLTGYTF 3
           Y QKHP N+ILL LFT  +S TVGVTCANTDGKIVLEALILTSAVV+SLTGY F
Sbjct: 95  YQQKHPHNYILLALFTVSISSTVGVTCANTDGKIVLEALILTSAVVSSLTGYAF 148



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/64 (62%), Positives = 49/64 (76%)
 Frame = -1

Query: 498 KEMYNTYSSVKVDLEAGGTTLFPGLSHAENDLRWGFIRKVYAILSAQILLTTLVSAITVL 319
           +++Y    + + DLE+G  TL+PGLS  EN LRWGFIRKVY ILSAQI+LTTLVS  TV 
Sbjct: 5   QQLYTRAKTEEFDLESG-ETLYPGLSVGENQLRWGFIRKVYGILSAQIVLTTLVSVTTVF 63

Query: 318 YTPL 307
           YTP+
Sbjct: 64  YTPI 67


>gb|ACU19337.1| unknown [Glycine max]
          Length = 246

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/54 (81%), Positives = 47/54 (87%)
 Frame = -2

Query: 164 YHQKHPVNFILLGLFTTCLSVTVGVTCANTDGKIVLEALILTSAVVASLTGYTF 3
           Y QKHP N+ILL LFT  +S TVGVTCANTDGKIVLEALILTSAVV+SLTGY F
Sbjct: 95  YQQKHPHNYILLALFTVSISSTVGVTCANTDGKIVLEALILTSAVVSSLTGYAF 148



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/64 (60%), Positives = 48/64 (75%)
 Frame = -1

Query: 498 KEMYNTYSSVKVDLEAGGTTLFPGLSHAENDLRWGFIRKVYAILSAQILLTTLVSAITVL 319
           +++Y    + + DLE+G  TL+PGLS  EN LRWGFIRKVY ILSAQI+LTTLVS   V 
Sbjct: 5   QQLYTRAKTEEFDLESG-ETLYPGLSVGENQLRWGFIRKVYGILSAQIVLTTLVSVTAVF 63

Query: 318 YTPL 307
           YTP+
Sbjct: 64  YTPI 67


Top