BLASTX nr result
ID: Coptis25_contig00028419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028419 (271 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21075.3| unnamed protein product [Vitis vinifera] 102 3e-20 ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4... 102 3e-20 ref|XP_004167948.1| PREDICTED: U-box domain-containing protein 7... 96 2e-18 ref|XP_004145507.1| PREDICTED: U-box domain-containing protein 7... 96 2e-18 ref|XP_003522411.1| PREDICTED: U-box domain-containing protein 1... 94 2e-17 >emb|CBI21075.3| unnamed protein product [Vitis vinifera] Length = 474 Score = 102 bits (254), Expect = 3e-20 Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%) Frame = +3 Query: 3 KRKLEAFEELQRVVKRLQMEEVMEDT--ALDVRRFAKDDSEARSTLAMLGAIPPLVNMID 176 KRK EAFEE++RVV+ LQ+ E + + A++VRR AK+D EAR+TLAMLGAIPPLV M+D Sbjct: 104 KRKTEAFEEVKRVVRDLQVGEGVRKSGGAVEVRRRAKEDLEARTTLAMLGAIPPLVGMLD 163 Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAIV 269 S S++ASLYALLNL IGND NKAAIV Sbjct: 164 SEDQE--SQIASLYALLNLGIGNDENKAAIV 192 >ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera] Length = 497 Score = 102 bits (254), Expect = 3e-20 Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%) Frame = +3 Query: 3 KRKLEAFEELQRVVKRLQMEEVMEDT--ALDVRRFAKDDSEARSTLAMLGAIPPLVNMID 176 KRK EAFEE++RVV+ LQ+ E + + A++VRR AK+D EAR+TLAMLGAIPPLV M+D Sbjct: 104 KRKTEAFEEVKRVVRDLQVGEGVRKSGGAVEVRRRAKEDLEARTTLAMLGAIPPLVGMLD 163 Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAIV 269 S S++ASLYALLNL IGND NKAAIV Sbjct: 164 SEDQE--SQIASLYALLNLGIGNDENKAAIV 192 >ref|XP_004167948.1| PREDICTED: U-box domain-containing protein 7-like [Cucumis sativus] Length = 502 Score = 96.3 bits (238), Expect = 2e-18 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 2/90 (2%) Frame = +3 Query: 3 KRKLEAFEELQRVVKRLQMEEVMEDTAL--DVRRFAKDDSEARSTLAMLGAIPPLVNMID 176 K+K E EE +RVVK+LQ E+++E A VR AK+D+EAR TL MLGAIPPLV M+D Sbjct: 115 KKKEEVLEEFKRVVKKLQDEDLVERRAAASGVRLLAKEDTEARGTLGMLGAIPPLVGMLD 174 Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAI 266 SK+ASLYALLNL IGND+NKAAI Sbjct: 175 LEDDE--SKIASLYALLNLGIGNDLNKAAI 202 >ref|XP_004145507.1| PREDICTED: U-box domain-containing protein 7-like [Cucumis sativus] Length = 502 Score = 96.3 bits (238), Expect = 2e-18 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 2/90 (2%) Frame = +3 Query: 3 KRKLEAFEELQRVVKRLQMEEVMEDTAL--DVRRFAKDDSEARSTLAMLGAIPPLVNMID 176 K+K E EE +RVVK+LQ E+++E A VR AK+D+EAR TL MLGAIPPLV M+D Sbjct: 115 KKKEEVLEEFKRVVKKLQDEDLVERRAAASGVRLLAKEDTEARGTLGMLGAIPPLVGMLD 174 Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAI 266 SK+ASLYALLNL IGND+NKAAI Sbjct: 175 LEDDE--SKIASLYALLNLGIGNDLNKAAI 202 >ref|XP_003522411.1| PREDICTED: U-box domain-containing protein 13-like [Glycine max] Length = 482 Score = 93.6 bits (231), Expect = 2e-17 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 2/91 (2%) Frame = +3 Query: 3 KRKLEAFEELQRVVKRLQMEEVMED--TALDVRRFAKDDSEARSTLAMLGAIPPLVNMID 176 K+K EA EL++VVK L+ E+ + A VR AK+DSEAR LAMLGAIPPLV M+D Sbjct: 97 KKKEEALAELKQVVKELREEDFRKQRIAAARVRSLAKEDSEARVNLAMLGAIPPLVGMLD 156 Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAIV 269 S ++ S++ASLYALLNL IGND NKAAIV Sbjct: 157 SEDAH--SQIASLYALLNLGIGNDANKAAIV 185