BLASTX nr result

ID: Coptis25_contig00028419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028419
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21075.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4...   102   3e-20
ref|XP_004167948.1| PREDICTED: U-box domain-containing protein 7...    96   2e-18
ref|XP_004145507.1| PREDICTED: U-box domain-containing protein 7...    96   2e-18
ref|XP_003522411.1| PREDICTED: U-box domain-containing protein 1...    94   2e-17

>emb|CBI21075.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  102 bits (254), Expect = 3e-20
 Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   KRKLEAFEELQRVVKRLQMEEVMEDT--ALDVRRFAKDDSEARSTLAMLGAIPPLVNMID 176
           KRK EAFEE++RVV+ LQ+ E +  +  A++VRR AK+D EAR+TLAMLGAIPPLV M+D
Sbjct: 104 KRKTEAFEEVKRVVRDLQVGEGVRKSGGAVEVRRRAKEDLEARTTLAMLGAIPPLVGMLD 163

Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAIV 269
           S      S++ASLYALLNL IGND NKAAIV
Sbjct: 164 SEDQE--SQIASLYALLNLGIGNDENKAAIV 192


>ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 497

 Score =  102 bits (254), Expect = 3e-20
 Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   KRKLEAFEELQRVVKRLQMEEVMEDT--ALDVRRFAKDDSEARSTLAMLGAIPPLVNMID 176
           KRK EAFEE++RVV+ LQ+ E +  +  A++VRR AK+D EAR+TLAMLGAIPPLV M+D
Sbjct: 104 KRKTEAFEEVKRVVRDLQVGEGVRKSGGAVEVRRRAKEDLEARTTLAMLGAIPPLVGMLD 163

Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAIV 269
           S      S++ASLYALLNL IGND NKAAIV
Sbjct: 164 SEDQE--SQIASLYALLNLGIGNDENKAAIV 192


>ref|XP_004167948.1| PREDICTED: U-box domain-containing protein 7-like [Cucumis sativus]
          Length = 502

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = +3

Query: 3   KRKLEAFEELQRVVKRLQMEEVMEDTAL--DVRRFAKDDSEARSTLAMLGAIPPLVNMID 176
           K+K E  EE +RVVK+LQ E+++E  A    VR  AK+D+EAR TL MLGAIPPLV M+D
Sbjct: 115 KKKEEVLEEFKRVVKKLQDEDLVERRAAASGVRLLAKEDTEARGTLGMLGAIPPLVGMLD 174

Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAI 266
                  SK+ASLYALLNL IGND+NKAAI
Sbjct: 175 LEDDE--SKIASLYALLNLGIGNDLNKAAI 202


>ref|XP_004145507.1| PREDICTED: U-box domain-containing protein 7-like [Cucumis sativus]
          Length = 502

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = +3

Query: 3   KRKLEAFEELQRVVKRLQMEEVMEDTAL--DVRRFAKDDSEARSTLAMLGAIPPLVNMID 176
           K+K E  EE +RVVK+LQ E+++E  A    VR  AK+D+EAR TL MLGAIPPLV M+D
Sbjct: 115 KKKEEVLEEFKRVVKKLQDEDLVERRAAASGVRLLAKEDTEARGTLGMLGAIPPLVGMLD 174

Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAI 266
                  SK+ASLYALLNL IGND+NKAAI
Sbjct: 175 LEDDE--SKIASLYALLNLGIGNDLNKAAI 202


>ref|XP_003522411.1| PREDICTED: U-box domain-containing protein 13-like [Glycine max]
          Length = 482

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   KRKLEAFEELQRVVKRLQMEEVMED--TALDVRRFAKDDSEARSTLAMLGAIPPLVNMID 176
           K+K EA  EL++VVK L+ E+  +    A  VR  AK+DSEAR  LAMLGAIPPLV M+D
Sbjct: 97  KKKEEALAELKQVVKELREEDFRKQRIAAARVRSLAKEDSEARVNLAMLGAIPPLVGMLD 156

Query: 177 SSHSNIASKVASLYALLNLCIGNDMNKAAIV 269
           S  ++  S++ASLYALLNL IGND NKAAIV
Sbjct: 157 SEDAH--SQIASLYALLNLGIGNDANKAAIV 185


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