BLASTX nr result

ID: Coptis25_contig00028408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028408
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]   129   2e-28
emb|CBI33642.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vi...   129   2e-28
ref|XP_002531475.1| mannose-6-phosphate isomerase, putative [Ric...   123   1e-26
ref|XP_002884330.1| hypothetical protein ARALYDRAFT_477494 [Arab...   121   5e-26

>emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]
          Length = 455

 Score =  129 bits (325), Expect = 2e-28
 Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 6/122 (4%)
 Frame = +2

Query: 2   GFVSLQELKDVICGVPEIVELVGNVNADQVTHLDKHAGVERVKTVLRSIFTQLMSVEKDI 181
           GFVSL ELK V+  VPEIVE+VG+ +A+QV  + +  G E+VK+VL+SIFTQLMS  K++
Sbjct: 189 GFVSLXELKIVLKDVPEIVEVVGSADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEM 248

Query: 182 XXXXXXXXXXXX------RQLTDKEELVLRLEKQYPNDIGVAATFFLNYVILNPGEALYL 343
                             RQLTDKE+LVLRLEKQYP D+GV + FF NYV LNPGEALYL
Sbjct: 249 VSKIITKLKIRLQMESQMRQLTDKEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYL 308

Query: 344 GA 349
           GA
Sbjct: 309 GA 310


>emb|CBI33642.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  129 bits (324), Expect = 2e-28
 Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 6/122 (4%)
 Frame = +2

Query: 2   GFVSLQELKDVICGVPEIVELVGNVNADQVTHLDKHAGVERVKTVLRSIFTQLMSVEKDI 181
           GFVSL ELK V+  VPEIVE+VG+ +A+QV  + +  G E+VK+VL+SIFTQLMS  K++
Sbjct: 99  GFVSLGELKIVLKDVPEIVEVVGSADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEM 158

Query: 182 XXXXXXXXXXXX------RQLTDKEELVLRLEKQYPNDIGVAATFFLNYVILNPGEALYL 343
                             RQLTDKE+LVLRLEKQYP D+GV + FF NYV LNPGEALYL
Sbjct: 159 VSKIITKLKIRLQMESQVRQLTDKEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYL 218

Query: 344 GA 349
           GA
Sbjct: 219 GA 220


>ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vitis vinifera]
          Length = 420

 Score =  129 bits (324), Expect = 2e-28
 Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 6/122 (4%)
 Frame = +2

Query: 2   GFVSLQELKDVICGVPEIVELVGNVNADQVTHLDKHAGVERVKTVLRSIFTQLMSVEKDI 181
           GFVSL ELK V+  VPEIVE+VG+ +A+QV  + +  G E+VK+VL+SIFTQLMS  K++
Sbjct: 154 GFVSLGELKIVLKDVPEIVEVVGSADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEM 213

Query: 182 XXXXXXXXXXXX------RQLTDKEELVLRLEKQYPNDIGVAATFFLNYVILNPGEALYL 343
                             RQLTDKE+LVLRLEKQYP D+GV + FF NYV LNPGEALYL
Sbjct: 214 VSKIITKLKIRLQMESQVRQLTDKEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYL 273

Query: 344 GA 349
           GA
Sbjct: 274 GA 275


>ref|XP_002531475.1| mannose-6-phosphate isomerase, putative [Ricinus communis]
           gi|223528902|gb|EEF30899.1| mannose-6-phosphate
           isomerase, putative [Ricinus communis]
          Length = 374

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 6/117 (5%)
 Frame = +2

Query: 17  QELKDVICGVPEIVELVGNVNADQVTHLDKHAGVERVKTVLRSIFTQLMSVEKDIXXXXX 196
           +ELK V+  +PEIVELVG  +A QV H+++  G E+VK+V+RSIFTQLMS  K++     
Sbjct: 110 KELKAVLQNIPEIVELVGTADAKQVLHVNEQDGEEKVKSVVRSIFTQLMSASKEMITEVI 169

Query: 197 XXXXXXX------RQLTDKEELVLRLEKQYPNDIGVAATFFLNYVILNPGEALYLGA 349
                        RQLTDKE+L+L+LEKQYP DIGV + FF NYV LNPGEALYLGA
Sbjct: 170 SKLKIRLHMESQVRQLTDKEQLILQLEKQYPADIGVISAFFFNYVKLNPGEALYLGA 226


>ref|XP_002884330.1| hypothetical protein ARALYDRAFT_477494 [Arabidopsis lyrata subsp.
           lyrata] gi|297330170|gb|EFH60589.1| hypothetical protein
           ARALYDRAFT_477494 [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score =  121 bits (304), Expect = 5e-26
 Identities = 69/122 (56%), Positives = 82/122 (67%), Gaps = 6/122 (4%)
 Frame = +2

Query: 2   GFVSLQELKDVICGVPEIVELVGNVNADQVTHLDKHAGVERVKTVLRSIFTQLMSVEKDI 181
           GF+ LQELK VI  +PEI ELVG+  A+QV  + +H   E+VK+V+R+IFT LMS + D 
Sbjct: 164 GFIPLQELKSVIQAIPEIEELVGSEEANQVFCISEH-DEEKVKSVVRTIFTLLMSADPDT 222

Query: 182 XXXXXXXXXXXX------RQLTDKEELVLRLEKQYPNDIGVAATFFLNYVILNPGEALYL 343
                             RQLTDKE LVL+LEKQYPNDIGV + FF NYV LNPGEALYL
Sbjct: 223 TKKIVSKLKRRLHMDSQERQLTDKERLVLKLEKQYPNDIGVISAFFFNYVKLNPGEALYL 282

Query: 344 GA 349
           GA
Sbjct: 283 GA 284


Top