BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028404
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    57   2e-06
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    55   6e-06
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]    55   6e-06

>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/146 (24%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
 Frame = -2

Query: 502 IKIYAPKLLSFRCKDYMGKDYSFESLPSLVNVDIDMEVESLYKYKRDDGIEFPAEEYVER 323
           +++ AP + S        K      + SLVN  +D+++       +D   ++ +E+Y   
Sbjct: 420 LEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQM-----MHQDRNFQYFSEDYSNM 474

Query: 322 IIRYLREIRHLKSLTLGAWFLQIISKPPAALESLSMQFLSLRYIKLKTWLSGDCIRAMKS 143
           +   L+++ H+++LT+G W L+++S     ++S+       RY+ L T      +  + S
Sbjct: 475 LREILKQLSHVENLTVGTWCLEVLS--VLEMKSMPSPLSKHRYLILNTLPKKWDLPGIAS 532

Query: 142 LLNMSPNVETLTVEVNKKCTMR-WHH 68
           LL  SP++E L ++VN    ++ W H
Sbjct: 533 LLKSSPDLEKLHIDVNPLNVLKFWEH 558


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
 Frame = -2

Query: 508 CKIKIYAPKLLSFRCKDYMGKDYSFESLPSLVNVDIDMEVESLYKYKRDDGIEFPAEEYV 329
           CK+ ++APKL SF+        +S  +L SL +V++ ++    Y Y+ D       +EY+
Sbjct: 235 CKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLDDVNVVLQ---RYYYRHDYQFYVDEDEYI 291

Query: 328 ER-----------IIRYLREIRHLKSLTLGAWFLQIISKPPAALESLSMQFLSLRYIKLK 182
                        +++ L +    KSLTL    ++++SK PAAL      F +L+Y+KLK
Sbjct: 292 SGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNKHPSPFSNLKYLKLK 351

Query: 181 T 179
           T
Sbjct: 352 T 352


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
           gi|222873902|gb|EEF11033.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
 Frame = -2

Query: 508 CKIKIYAPKLLSFRCKDYMGKDYSFESLPSLVNVDIDMEVESLYKYKRDDGIEFPAEEYV 329
           CK+ ++APKL SF+   + G    F S  +L ++D    V   Y++  +       +EY+
Sbjct: 254 CKVMLFAPKLTSFK---FYGNTPLFWSEVNLTSLDDVNVVLQRYQHSHNYPFYVVEDEYI 310

Query: 328 ER-----------IIRYLREIRHLKSLTLGAWFLQIISKPPAALESLSMQFLSLRYIKLK 182
                        +I+ L +    KSLTL    ++I+S+ PAAL+     F +L+Y+KLK
Sbjct: 311 SEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKLK 370

Query: 181 T 179
           T
Sbjct: 371 T 371


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/136 (25%), Positives = 69/136 (50%)
 Frame = -2

Query: 502 IKIYAPKLLSFRCKDYMGKDYSFESLPSLVNVDIDMEVESLYKYKRDDGIEFPAEEYVER 323
           +++ AP + S        K      + SLVN  +D+++       +D   ++ +E+Y   
Sbjct: 267 LEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQM-----MHQDRNFQYFSEDYSNM 321

Query: 322 IIRYLREIRHLKSLTLGAWFLQIISKPPAALESLSMQFLSLRYIKLKTWLSGDCIRAMKS 143
           +   L+++ H+++LT+G W L+++S     ++S+       RY+ L T      +  + S
Sbjct: 322 LREILKQLSHVENLTVGTWCLEVLS--VLEMKSMPSPLSKHRYLILNTLPKKWDLPGIAS 379

Query: 142 LLNMSPNVETLTVEVN 95
           LL  SP++E L ++VN
Sbjct: 380 LLKSSPDLEKLHIDVN 395