BLASTX nr result

ID: Coptis25_contig00028403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028403
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533927.1| protein binding protein, putative [Ricinus c...   110   9e-23
ref|XP_002280917.1| PREDICTED: uncharacterized protein LOC100266...   110   9e-23
dbj|BAJ94761.1| predicted protein [Hordeum vulgare subsp. vulgare]    110   1e-22
ref|XP_002449821.1| hypothetical protein SORBIDRAFT_05g023940 [S...   110   2e-22
gb|AFK48165.1| unknown [Lotus japonicus]                              109   2e-22

>ref|XP_002533927.1| protein binding protein, putative [Ricinus communis]
           gi|223526107|gb|EEF28456.1| protein binding protein,
           putative [Ricinus communis]
          Length = 321

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/66 (80%), Positives = 55/66 (83%)
 Frame = +3

Query: 3   TLKFRFFVTRDIVFIFAAVQLVIASLAYLAYFTDSYQQFWLRSSWGFTGGISFYYICGAL 182
           TLKFRFFVTRDI FIF AVQLVIASLAYL Y  DSYQQ WLR +WGF   +SFYYICGAL
Sbjct: 98  TLKFRFFVTRDIAFIFLAVQLVIASLAYLVYLIDSYQQSWLRHTWGFDNELSFYYICGAL 157

Query: 183 LFFAFL 200
           LFFA L
Sbjct: 158 LFFALL 163


>ref|XP_002280917.1| PREDICTED: uncharacterized protein LOC100266317 [Vitis vinifera]
           gi|296082473|emb|CBI21478.3| unnamed protein product
           [Vitis vinifera]
          Length = 322

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/66 (78%), Positives = 55/66 (83%)
 Frame = +3

Query: 3   TLKFRFFVTRDIVFIFAAVQLVIASLAYLAYFTDSYQQFWLRSSWGFTGGISFYYICGAL 182
           TLKFRFFVTRDI+FIF AVQLVIAS AYL Y  D +QQFWLR +WGF   ISFYYICGAL
Sbjct: 99  TLKFRFFVTRDIIFIFLAVQLVIASFAYLVYLIDGFQQFWLRLAWGFDSEISFYYICGAL 158

Query: 183 LFFAFL 200
           LFFA L
Sbjct: 159 LFFALL 164


>dbj|BAJ94761.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 323

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = +3

Query: 3   TLKFRFFVTRDIVFIFAAVQLVIASLAYLAYFTDSYQQFWLRSSWGFTGGISFYYICGAL 182
           TLKFRFFVTRDI+FIFA VQ VI++LAYL +F D YQQ+WLR++WGF   ++FYYICGAL
Sbjct: 101 TLKFRFFVTRDILFIFALVQFVISALAYLVHFIDGYQQYWLRAAWGFDNEVTFYYICGAL 160

Query: 183 LFFAFL 200
           LFFAFL
Sbjct: 161 LFFAFL 166


>ref|XP_002449821.1| hypothetical protein SORBIDRAFT_05g023940 [Sorghum bicolor]
           gi|241935664|gb|EES08809.1| hypothetical protein
           SORBIDRAFT_05g023940 [Sorghum bicolor]
          Length = 316

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = +3

Query: 3   TLKFRFFVTRDIVFIFAAVQLVIASLAYLAYFTDSYQQFWLRSSWGFTGGISFYYICGAL 182
           TLKFRFFVTRDI+FIFA VQ+VI++LAYL +F D YQQ+WLR++WGF   +SFYYICGAL
Sbjct: 94  TLKFRFFVTRDILFIFALVQIVISALAYLVHFIDGYQQYWLRTAWGFDNEVSFYYICGAL 153

Query: 183 LFFAFL 200
           LFFA L
Sbjct: 154 LFFALL 159


>gb|AFK48165.1| unknown [Lotus japonicus]
          Length = 185

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/66 (77%), Positives = 55/66 (83%)
 Frame = +3

Query: 3   TLKFRFFVTRDIVFIFAAVQLVIASLAYLAYFTDSYQQFWLRSSWGFTGGISFYYICGAL 182
           TLKFRFFVTRDI+FIF AVQL+IASLAYL Y  D YQQ+WLR  WGF   +SFYYICGAL
Sbjct: 99  TLKFRFFVTRDILFIFLAVQLIIASLAYLVYLIDGYQQYWLRLLWGFDSELSFYYICGAL 158

Query: 183 LFFAFL 200
           LFFA L
Sbjct: 159 LFFALL 164


Top